CX292144

Overview
NameCX292144
Unique NameCX292144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.252e-88
Identity = 167/227 (73.57%), Postives = 184/227 (81.06%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+SQ +IEIDSL+EGIDFY  ITRARFEEL  DLFR  M+PVEK LRD+K+DK+QVHD+VLVGGSTRIPKVQ+LL DFF+GKEL KSINPDE           ILSG+ +E VQD           GIETAGGVMT LI RNTTIPTK  + F+TYSDNQPGVLIQVYEGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  260 RRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 486          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 1.635e-88
Identity = 168/227 (74.01%), Postives = 183/227 (80.62%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+SQ +IEIDSL+EGIDFY  ITRARFEEL  DLFR  M+PVEK LRD+K+DKSQVHD+VLVGGSTRIPKVQ+LL D F+GKEL KSINPDE           ILSG+ +E VQD           GIETAGGVMT LI RNTTIPTK  Q F+TYSDNQPGVLIQVYEGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  262 RRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 488          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 325.479 bits (833), Expect = 1.635e-88
Identity = 163/227 (71.81%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSL+EGIDFY +ITRARFEEL  DLFRK MEPVE+ LRDSK+DK+ V+++VLVGGSTRIP+VQ+L+ DFFNGKE CKSINPDE           +L+G+ +EK QD           GIETAGGVMT LI RNTTIPTKK +IFSTYSDNQPGVLIQV+EGERARTKD NLLGKFEL+GIPPAPRGVPQI V FD+DANGIL+
Sbjct:  259 RRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 2.135e-88
Identity = 164/227 (72.25%), Postives = 185/227 (81.50%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSLYEGIDFY +ITRARFEEL  DLFR  MEPVEK LRDSKIDKS V+++VLVGGSTRIP++Q+L+ DFFNGKE CKSINPDE           IL G+ +EK QD           GIETAGGVMT LI RNTTIPTKK ++FSTY+DNQPGVLIQV+EGERARTKD NLLGKFEL+GIPPAPRGVPQI V FD+DANGIL+
Sbjct:  259 RRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 324.709 bits (831), Expect = 2.788e-88
Identity = 164/227 (72.25%), Postives = 185/227 (81.50%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSL+EG DFY +ITRARFEELN DLFR  M+PVEK LRD+K+DKS +HD+VLVGGSTRIPKVQ+LLQD FNGKEL KSINPDE           IL G+ +++VQD           GIETAGGVM+ LI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  261 RRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 487          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.788e-88
Identity = 161/226 (71.24%), Postives = 185/226 (81.86%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGIL 680
            R +RTACERAKRTLSS++Q T+EIDSL+EG+DFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPK+Q+LLQDFFNG+EL KSINPDE           +L G+  EKVQD           G+ETAGGVMTTLI RN TIPTK+ Q F+TYSDNQPGVLIQVYEGERA T+DNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL
Sbjct:  263 RRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGIL 488          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.788e-88
Identity = 163/227 (71.81%), Postives = 184/227 (81.06%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +QTTIEIDSL+EG+DFY ++TRARFEEL  DLFR  +EPVEK LRD+KIDK+ VH++VLVGGSTRIP++ +L+ DFFNGKE  KSINPDE           IL+G+ +EK QD           GIETAGGVMT LI RNTT+PTKK +IFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFEL GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  259 RRLRTACERAKRTLSSAAQTTIEIDSLFEGVDFYTSLTRARFEELCQDLFRSTLEPVEKVLRDAKIDKAAVHEIVLVGGSTRIPRIVKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSEKTQDLLLLDVSPLSLGIETAGGVMTPLIKRNTTVPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.788e-88
Identity = 164/227 (72.25%), Postives = 182/227 (80.18%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSL+EGIDFY +ITRARFEEL  DLFR C++PV+K L+DSK+DK  +H++VLVGGSTRIPKVQQLLQD FNGKEL KSINPDE           ILS EG  KV D           G+ETAGGVMTTLIPRNTTIP KK Q FSTYSDNQ GVL+QVYEGERA T+DNNLLGKFELT IPPAPRGVPQI V FDIDANGIL+
Sbjct:  260 RRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRGCLDPVDKVLKDSKLDKKTIHEIVLVGGSTRIPKVQQLLQDHFNGKELNKSINPDEAVAYGAAVQAAILSNEGGAKVADILLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKNQTFSTYSDNQTGVLVQVYEGERAMTRDNNLLGKFELTNIPPAPRGVPQIEVTFDIDANGILN 486          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.642e-88
Identity = 162/227 (71.37%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q  +EIDSLYEGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+++HD+VLVGGSTRIPKVQ+LLQD+FNG++L KSINPDE           IL G+ +EKVQD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA TKDNNLLG+F+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  263 RRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILN 489          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 324.324 bits (830), Expect = 3.642e-88
Identity = 162/227 (71.37%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q  +EIDSLYEGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+++HD+VLVGGSTRIPKVQ+LLQD+FNG++L KSINPDE           IL G+ +EKVQD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA TKDNNLLG+F+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  263 RRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILN 489          
The following BLAST results are available for this feature:
BLAST of CX292144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_BRUMA1.252e-8873.57Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP7A_CAEEL1.635e-8874.01Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP72_SCHPO1.635e-8871.81Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_SCHPO2.135e-8872.25Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP7D_DROME2.788e-8872.25Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP76_PIG2.788e-8871.24Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP71_PUCGR2.788e-8871.81Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HS7C2_DICDI2.788e-8872.25Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HS71L_MACFA3.642e-8871.37Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HS71L_HUMAN3.642e-8871.37Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionC04011A09SK FlavFr1 Citrus clementina cDNA clone C04011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292144 ID=CX292144; Name=CX292144; organism=Citrus clementina; type=EST; length=684bp
CTCGTGCCGTGCGGACGGCATGTGAGCGGGCTAAGAGGACTCTATCTTCT
ACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACTT
CTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTGT
TCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAATT
GATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAAT
TCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTGT
GCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCAG
GCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGCT
GCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTAA
TGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCAA
ATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGTA
TGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTCG
AGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGTG
TGCTTTGACATTGATGCTAATGGTATATTGCATG
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