CX292144

Overview
NameCX292144
Unique NameCX292144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 4.756e-88
Identity = 162/227 (71.37%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q ++EIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA TKDNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  261 RRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILN 487          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 323.939 bits (829), Expect = 4.756e-88
Identity = 162/227 (71.37%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q ++EIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA TKDNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  261 RRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILN 487          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 4.756e-88
Identity = 164/227 (72.25%), Postives = 185/227 (81.50%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTAC+RAKRTLSS+SQ +IEIDSL+EGIDFY  ITRARFEEL  DLFR  +EPVEK LRD+K+DKSQ+H++VLVGGSTRIPKVQ+LLQDFFNG+EL KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  262 RRLRTACDRAKRTLSSSSQASIEIDSLFEGIDFYTAITRARFEELCSDLFRGTLEPVEKALRDAKLDKSQIHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKQTQSFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 488          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 4.756e-88
Identity = 165/227 (72.69%), Postives = 183/227 (80.62%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT +EIDSL +G DFY  ITRARFEELN DLFR  ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE           ILSGE  E VQD           G+ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQV+EGERA TKDNNLLGKFEL+GIPPAPRG PQI V FDIDANGIL+
Sbjct:  259 RRLRTACERAKRTLSSSAQTNLEIDSLCDGTDFYTVITRARFEELNADLFRGTLDPVEKALRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGEKCEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERALTKDNNLLGKFELSGIPPAPRGTPQIEVTFDIDANGILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 4.756e-88
Identity = 167/227 (73.57%), Postives = 183/227 (80.62%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+SQ +IEIDSL+EGIDFY  ITRARFEEL  DLFR  M+PVEK LR +K+DK+QVHD+VLVGGSTRIPKVQ+LL DFF+GKEL KSINPDE           ILSG+ +E VQD           GIETAGGVMT LI RNTTIPTK  Q F+TYSDNQPGVLIQVYEGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:   18 RRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRVAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 244          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.212e-88
Identity = 162/226 (71.68%), Postives = 184/226 (81.42%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGIL 680
            R +RTACERAKRTLSS++Q T+EIDSL+EG+DFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HDVVLVGGSTRIP+VQ+LLQDFFNGKEL KSINPDE           +L G+  EKV+D           G+ETAGGVMTTLI RN TIPTK+ Q F+TYSDNQPGV IQVYEGERA TKDNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL
Sbjct:  263 RRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPRVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVRDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGIL 488          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 323.553 bits (828), Expect = 6.212e-88
Identity = 165/227 (72.69%), Postives = 183/227 (80.62%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +QTTIEIDSL+EGIDFY +ITRARFEEL  DLF   +EPVEK LRDSKIDK  VH++VLVGGSTRIPKVQ+LL DFFNG+EL KSINPDE           ILSG+ +EK QD           GIETAGGV T LI RNTT+PTKK +IFSTY+DNQPGVLIQV+EGERARTKDNNLLGKFEL+GIPPAPRGVPQI V FD+DAN IL+
Sbjct:  259 RRLRTACERAKRTLSSAAQTTIEIDSLFEGIDFYTSITRARFEELCGDLFSHTIEPVEKVLRDSKIDKGSVHEIVLVGGSTRIPKVQKLLTDFFNGRELNKSINPDEAVAYGAAVQAAILSGDTSEKTQDLLLLDVAPLSMGIETAGGVFTPLIKRNTTVPTKKSEIFSTYADNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDANAILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 8.113e-88
Identity = 163/227 (71.81%), Postives = 184/227 (81.06%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R + TACERAKRTLSS++Q +IEIDSLYEG+DFY +ITRARFEELN DLFR  ++PVEK LRD+K+DK+QVHD+VLVGGSTRIPK+++LLQDFFNGKEL KSINPDE              G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGERA TKDNNLLGKFELTGIPPAPRGVPQI V FDIDANGI++
Sbjct:  261 RRLATACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKMEKLLQDFFNGKELNKSINPDEAVAYGAAVQAESSLGDKSENVQDLVLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMN 487          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 8.113e-88
Identity = 162/227 (71.37%), Postives = 185/227 (81.50%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSL+EG+DFY ++TRARFEELN DLFR  MEPV K LRD+K+DK Q+HD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMTTLI RNTTIPTK+ QIF+TY+DNQPGVLIQV+EGERA T+DNN LGKFEL+ IPPAPRGVPQ+ V FDIDANGIL+
Sbjct:  261 RRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNSLGKFELSAIPPAPRGVPQVEVTFDIDANGILN 487          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 8.113e-88
Identity = 161/227 (70.93%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q  +EIDSLYEGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+++HD+VLVGGSTRIPKVQ+LLQD+FNG++L KSINPDE           IL G+ +EKVQD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA T+DNNLLG+F+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  263 RRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILN 489          
The following BLAST results are available for this feature:
BLAST of CX292144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_PONAB4.756e-8871.37Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN4.756e-8871.37Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP70_XENLA4.756e-8872.25Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_SCHMA4.756e-8872.69Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP70_ONCVO4.756e-8873.57Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP76_SAGOE6.212e-8871.68Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP72_USTMA6.212e-8872.69Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP7C_ICTPU8.113e-8871.81Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7A_DROME8.113e-8871.37Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HS71L_PIG8.113e-8870.93Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]

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Properties
Property NameValue
Genbank descriptionC04011A09SK FlavFr1 Citrus clementina cDNA clone C04011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292144 ID=CX292144; Name=CX292144; organism=Citrus clementina; type=EST; length=684bp
CTCGTGCCGTGCGGACGGCATGTGAGCGGGCTAAGAGGACTCTATCTTCT
ACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACTT
CTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTGT
TCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAATT
GATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAAT
TCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTGT
GCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCAG
GCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGCT
GCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTAA
TGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCAA
ATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGTA
TGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTCG
AGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGTG
TGCTTTGACATTGATGCTAATGGTATATTGCATG
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