CX292144

Overview
NameCX292144
Unique NameCX292144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.361e-87
Identity = 162/227 (71.37%), Postives = 183/227 (80.62%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSLYEG+DFY +ITRARFEELN DLFR  +EPVEK LRD+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  264 RRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILN 490
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.361e-87
Identity = 162/227 (71.37%), Postives = 183/227 (80.62%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSLYEG+DFY +ITRARFEELN DLFR  +EPVEK LRD+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  264 RRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILN 490
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.361e-87
Identity = 162/227 (71.37%), Postives = 183/227 (80.62%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSLYEG+DFY +ITRARFEELN DLFR  +EPVEK LRD+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  264 RRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRVTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILN 490
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 2.361e-87
Identity = 162/227 (71.37%), Postives = 183/227 (80.62%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSLYEG+DFY +ITRARFEELN DLFR  +EPVEK LRD+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  264 RRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILN 490
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.083e-87
Identity = 161/227 (70.93%), Postives = 187/227 (82.38%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q +IEIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+H++VLVGGSTRIPK+Q+LLQDFFNG+EL KSINPDE           IL G+ +E +QD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA TKDN+LLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  263 RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGPLEPVEKALRDAKLDKAQIHEIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENLQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNSLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 489
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 4.027e-87
Identity = 161/227 (70.93%), Postives = 185/227 (81.50%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT+IEIDSLYEGIDFY +ITRARFEEL  DLFR  ++PV K L D+KIDKSQV ++VLVGGSTRIPK+Q+L+ DFFNGKEL KSINPDE           IL+G+ + K QD           GIETAGG+MT LIPRN+TIPTKK + FSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  260 RRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLDPVGKVLADAKIDKSQVEEIVLVGGSTRIPKIQKLVSDFFNGKELNKSINPDEAVAYGAAVQAAILTGDTSSKTQDILLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 486
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87
Identity = 160/227 (70.48%), Postives = 186/227 (81.94%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q ++EIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGERA T+DNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  261 RRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILN 487
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 6.868e-87
Identity = 161/227 (70.93%), Postives = 183/227 (80.62%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERA+RTLSS++Q +IEIDSL+EGIDFY +ITRARFEELN DLFR  +EPVEK LRD+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+
Sbjct:  264 RRLRTACERARRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILN 490
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 319.701 bits (818), Expect = 8.970e-87
Identity = 160/227 (70.48%), Postives = 186/227 (81.94%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q ++EIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGERA T+DNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  261 RRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILN 487
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 8.970e-87
Identity = 160/227 (70.48%), Postives = 186/227 (81.94%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q ++EIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGERA T+DNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  261 RRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILN 487
The following BLAST results are available for this feature:
BLAST of CX292144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_MOUSE2.361e-8771.37Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN2.361e-8771.37Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI2.361e-8771.37Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN2.361e-8771.37Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_PLEWA3.083e-8770.93Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP71_CANAL4.027e-8770.93Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP71_RAT6.868e-8770.48Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP70_CHICK6.868e-8770.93Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HS71B_MOUSE8.970e-8770.48Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE8.970e-8770.48Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]

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Properties
Property NameValue
Genbank descriptionC04011A09SK FlavFr1 Citrus clementina cDNA clone C04011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292144 ID=CX292144; Name=CX292144; organism=Citrus clementina; type=EST; length=684bp
CTCGTGCCGTGCGGACGGCATGTGAGCGGGCTAAGAGGACTCTATCTTCT
ACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACTT
CTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTGT
TCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAATT
GATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAAT
TCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTGT
GCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCAG
GCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGCT
GCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTAA
TGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCAA
ATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGTA
TGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTCG
AGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGTG
TGCTTTGACATTGATGCTAATGGTATATTGCATG
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