CX292144

Overview
NameCX292144
Unique NameCX292144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 318.546 bits (815), Expect = 1.998e-86
Identity = 158/227 (69.60%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT++EIDSL+EGIDFY +ITRARFEEL  DLFR  ++PVEK LRD+K+DKSQV ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           IL+G+ + K QD           GIETAGGVMT LIPRN+TIPTKK +IFSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FD+D+NGIL+
Sbjct:  258 RRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILN 484          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 318.161 bits (814), Expect = 2.610e-86
Identity = 157/227 (69.16%), Postives = 187/227 (82.38%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT++EIDSL+EGIDFY +ITRARFEEL  DLFR  ++PVEK LRD+K+DKSQV ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           IL+G+ + K QD           GIETAGGVMT LIPRN+TIPTKK ++FSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FD+D+NGIL+
Sbjct:  258 RRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILN 484          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 317.775 bits (813), Expect = 3.409e-86
Identity = 160/227 (70.48%), Postives = 185/227 (81.50%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT+IEIDSLYEGIDFY +ITRARFEEL  DLFR  +EPV+K L D+KIDKS+V ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           ILSG+ + K QD           GIETAGG+MT LIPRN+TIPTKK + FSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  259 RRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLEPVDKVLSDAKIDKSKVDEIVLVGGSTRIPKVQKLVSDYFNGKEPNRSINPDEAVAYGAAVQAAILSGDTSSKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAQTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.409e-86
Identity = 163/228 (71.49%), Postives = 184/228 (80.70%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q  IEIDSL++GIDF +TITRARFE++  D FRK MEPVEK LRDSK+ KSQVH+VVLVGGSTRIPKVQQLL DFFNGKE CKSINPDE           ILSG + +EK+QD           G+ETAGGVMTTLI RNTT+PTKK Q FSTY+DNQPGVLIQV+EGER+ T+DNNLLGKF L GIPP PRGVPQI+V FDIDANGIL+
Sbjct:  263 RRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARFEDMCGDYFRKTMEPVEKVLRDSKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPCKSINPDEAVAFGATVQAAILSGNDSSEKLQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTVPTKKSQTFSTYADNQPGVLIQVFEGERSMTRDNNLLGKFSLDGIPPMPRGVPQIDVTFDIDANGILN 490          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.452e-86
Identity = 161/228 (70.61%), Postives = 183/228 (80.26%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +QT+IEIDSLYEG+DFY +ITRARFEEL  DLFR  MEPVE+ LRD+KIDKS VH++VLVGGSTRIPK+Q+++ DFFNGKE  KSINPDE           ILSG+ + K   +           GIETAGGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGERARTKDNNLLGKFELTGIPPAPRGVPQI V FD+DANGI++
Sbjct:  259 RRLRTACERAKRTLSSAAQTSIEIDSLYEGVDFYTSITRARFEELCQDLFRSTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKMVSDFFNGKEPNKSINPDEGVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMN 486          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.295e-85
Identity = 160/227 (70.48%), Postives = 181/227 (79.74%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q  IEIDSL EGIDFY +ITRARFEEL  DLFR  ++PVEK LRD+K+DK  VH++VLVGGSTRIPKVQ+LLQDFFNG+EL KSINPDE           IL+G+ +E VQD           G+ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGERA  +DNNLLGKFEL+GIPP PRGVPQI V FDIDANGIL+
Sbjct:  263 RRLRTACERAKRTLSSSAQANIEIDSLLEGIDFYTSITRARFEELCSDLFRSTLDPVEKALRDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILN 489          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 314.694 bits (805), Expect = 2.886e-85
Identity = 158/227 (69.60%), Postives = 183/227 (80.62%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTA ERAKRTLSS++QT+IEIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK L DSK+DKSQ+ ++VLVGGSTRIPKVQ+L+ DFFNGKE  +SINPDE           IL+G+ +   QD           GIETAGG+MT LIPRN+TIPTKK ++FSTY+DNQPGVLIQV+EGER RTKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+
Sbjct:  259 RRLRTAAERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCADLFRSTLEPVEKVLADSKLDKSQIDEIVLVGGSTRIPKVQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSSTTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 2.886e-85
Identity = 160/228 (70.18%), Postives = 182/228 (79.82%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +QT+IEIDSLYEGIDFY +ITRARFEEL  DLFR  M+PVE+ LRD+KIDKS VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +           GIETAGGVMT LI RNTTIPTKK + FST++DNQPGVLIQV+EGERARTKDNNLLGKFELTGIPPAPRGVPQI V FD+DANGI++
Sbjct:  259 RRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMN 486          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 2.886e-85
Identity = 157/228 (68.86%), Postives = 185/228 (81.14%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT+IEIDSL+EGIDFY +ITRARFEEL  DLFR  ++PV++ L D+KIDKSQVH++VLVGGSTRIP++Q+L+ D+FNGKE  KSINPDE           ILSG+ + K   +           GIETAGG+MT LIPRNTTIPTKK ++FST+SDNQPGVLIQVYEGER RTKDNNLLGKFELTGIPPAPRGVPQI V FD+DANGI++
Sbjct:  259 RRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRSTLQPVDRVLTDAKIDKSQVHEIVLVGGSTRIPRIQKLISDYFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTSEILLLDVAPLSLGIETAGGMMTKLIPRNTTIPTKKSEVFSTFSDNQPGVLIQVYEGERQRTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMN 486          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 4.922e-85
Identity = 159/227 (70.04%), Postives = 185/227 (81.50%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q ++EIDSL+EGIDFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ET GGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA TKDNNLLG+FEL+GIPPAP GVPQI V F+IDANGIL+
Sbjct:  259 RRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETPGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAP-GVPQIEVTFEIDANGILN 484          
The following BLAST results are available for this feature:
BLAST of CX292144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_YEAST1.998e-8669.60Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP72_YEAST2.610e-8669.16Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP72_CANAL3.409e-8670.48Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_ACHKL3.409e-8671.49Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP70_TRIRU4.452e-8670.61Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_ECHGR1.295e-8570.48Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP74_YEAST2.886e-8569.60Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP72_PARBA2.886e-8570.18Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_NEUCR2.886e-8568.86Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP71_CERAE4.922e-8570.04Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]

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Properties
Property NameValue
Genbank descriptionC04011A09SK FlavFr1 Citrus clementina cDNA clone C04011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292144 ID=CX292144; Name=CX292144; organism=Citrus clementina; type=EST; length=684bp
CTCGTGCCGTGCGGACGGCATGTGAGCGGGCTAAGAGGACTCTATCTTCT
ACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACTT
CTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTGT
TCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAATT
GATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAAT
TCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTGT
GCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCAG
GCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGCT
GCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTAA
TGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCAA
ATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGTA
TGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTCG
AGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGTG
TGCTTTGACATTGATGCTAATGGTATATTGCATG
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