CX292144

Overview
NameCX292144
Unique NameCX292144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 313.538 bits (802), Expect = 6.429e-85
Identity = 156/227 (68.72%), Postives = 184/227 (81.06%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTA ERAKR LSS+SQT+IEIDSL+EG+DFY ++TRARFEEL  DLFR  +EPVEK L+DSK+DKSQ+ ++VLVGGSTRIPK+Q+L+ DFFNGKE  +SINPDE           IL+G+ + K QD           GIETAGG+MT LIPRN+TIPTKK + FSTY+DNQPGVLIQV+EGER RTKDNNLLGKFEL+GIPPAPRGVPQI+V FDIDANGIL+
Sbjct:  259 RRLRTAAERAKRALSSSSQTSIEIDSLFEGMDFYTSLTRARFEELCADLFRSTLEPVEKVLKDSKLDKSQIDEIVLVGGSTRIPKIQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSTKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIDVTFDIDANGILN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.190e-84
Identity = 161/228 (70.61%), Postives = 182/228 (79.82%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +QT+IEIDSL+EGIDFY +ITRARFEEL  DLFR  MEPVE+ LRD+KIDKS VH++VLVGGSTRIPK+Q+L+ D+FN KE  KSINPDE           ILSG+ + K   +           GIETAGGVMT L+ RNTTIPTKK + FSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQI V FD+DANGI++
Sbjct:  259 RRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQRLVSDYFN-KEANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSVGIETAGGVMTPLVKRNTTIPTKKSETFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMN 485          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.167e-84
Identity = 157/227 (69.16%), Postives = 183/227 (80.62%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT+IEIDSL+EGIDFY +ITRARFEEL  DLFR  ++PVEK LRD+K+ K++VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           IL+G+ +EKVQD           GIETAGGVMT LI RNTTIP KK + FSTY+DNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAP  VPQI V FD+ A+GIL+
Sbjct:  264 RRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKMAKNEVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILAGDQSEKVQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPAKKSETFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPPRVPQIEVSFDVGADGILN 490          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 7.108e-84
Identity = 161/228 (70.61%), Postives = 182/228 (79.82%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +QT+IEIDSL+EGIDFY +ITRARFEEL  DLFR  MEPVE+ LRD+KIDKS VH++VLVGGSTRIPK+Q+L+ DFFN K+  KSINPDE           ILSG+ + K   +           GIETAGGVMT LI RNTTIPTKK + FSTYSDNQPGVLIQV+EGERARTKDNNLLGKFELTGIPPAPRGVPQI V FD+DANGI++
Sbjct:  129 RRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKLVSDFFN-KDANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMN 355          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.607e-83
Identity = 158/228 (69.30%), Postives = 181/228 (79.39%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +QT+IEIDSLYEGIDFY +ITRARFEEL  DLFR  M+PVE+ LRD+KIDKS VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +           GIETAGGVMT LI RNTTIPTKK + FST++DNQPGVLIQV+EGERARTK+NNLLGKFELTGIPPAP GVPQI V FD+DANGI++
Sbjct:  258 RRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDSTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKENNLLGKFELTGIPPAP-GVPQIEVTFDVDANGIMN 484          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP7X_PIG (Heat shock 70 kDa protein (Fragment) OS=Sus scrofa PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.286e-82
Identity = 155/227 (68.28%), Postives = 179/227 (78.85%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFS-TYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGIL 680
            R +RTACERAKRTLSS++Q T+EIDSL+EG+DFY +ITRARFEEL  DLFR  +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPK+Q+LLQDFFNG+EL KSINPDE           +L G+  EKVQD           G+ETAGGVMTTLI RN TIPTK+ Q F     +NQPGVLIQVYEGERA T+DNNLLG+FEL+ IPP PRGVPQI V FDIDANGIL
Sbjct:    1 RRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQNFHYLLQNNQPGVLIQVYEGERAMTRDNNLLGRFELSRIPPTPRGVPQIEVTFDIDANGIL 227          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.286e-82
Identity = 150/227 (66.08%), Postives = 176/227 (77.53%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+SQ ++EIDSLY+GIDFY +ITRARFEEL  DLF  C+EPVEK L+D K+DK  + ++VLVGGSTRIPKVQQL+Q+ FNGKEL KSINPDE           ILSG+ + ++ +           GIET GGVMT ++PRNT IP KK Q FST++DNQ GVLIQVYEGER  TKDNNLLGKFELTGIPPAPRG PQI V FD+D+NGIL+
Sbjct:  262 RRLRTACERAKRTLSSSSQASVEIDSLYDGIDFYTSITRARFEELCSDLFNNCIEPVEKVLKDCKLDKKSIDEIVLVGGSTRIPKVQQLIQNLFNGKELNKSINPDEAVAYGAAVQAAILSGDKSSRISELIFIDVAPLSLGIETVGGVMTNIVPRNTIIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRGTPQIEVSFDVDSNGILN 488          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.652e-82
Identity = 156/228 (68.42%), Postives = 180/228 (78.95%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++Q  IEIDSL++GIDF +TITRARFE++  D FRK MEPV   LRD+K+ KSQVH+VVLVGGSTRIPKVQQLL DFFNGKE  KSINPDE           ILSG + ++K+QD           G+ETAGGVMTTLI RNTT+PTKK Q FSTY+DNQPGVLIQ++EGER+ T+DNNLLGKF L GIPP PRGVPQI+V FDIDANGI +
Sbjct:  263 RRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARFEDMCGDYFRKTMEPVAPVLRDAKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPNKSINPDEPVAYGATVQAAILSGNDSSQKLQDLLLLDVTPLSLGLETAGGVMTTLIARNTTVPTKKSQTFSTYADNQPGVLIQLFEGERSMTRDNNLLGKFNLDGIPPMPRGVPQIDVTFDIDANGIFN 490          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 8.688e-82
Identity = 161/231 (69.70%), Postives = 182/231 (78.79%), Query Frame = 3
Query:    3 RAVR---TACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            RA+R   TACERAKRTLSS +QT+IEIDSLYEGIDFY +ITRARFEEL  DLFR  MEPVE+ LRD+KIDKS VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+ + K   +           GIETAGGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGERARTKDNNLLGKFELTGIP A RGVPQI V FD+DANGI++
Sbjct:  257 RALRRSPTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPRA-RGVPQIEVTFDVDANGIMN 486          
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.936e-81
Identity = 155/228 (67.98%), Postives = 180/228 (78.95%), Query Frame = 3
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS++QT+IEIDSL+EGIDF+ + TRARFEE+  DLFR  MEP E+ LRD KIDKS VH++VL GGSTRIPKVQ+L+ DFFNGKE CKSINPDE           ILSG+ + K  ++           GIETAGGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGERARTKD NL+GKFEL+GI PAPRGVPQI V FD+DANGI++
Sbjct:  259 RRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFFTSNTRARFEEVGQDLFRGNMEPGERTLRDDKIDKSSVHEIVLGGGSTRIPKVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILSGDTSSKSTKEILLLDVAPLSLGIETAGGVMTALIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDINLMGKFELSGIRPAPRGVPQIEVTFDLDANGIMN 486          
The following BLAST results are available for this feature:
BLAST of CX292144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP73_YEAST6.429e-8568.72Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP70_EMENI3.190e-8470.61Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_BLAEM4.167e-8469.16Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP70_PENCI7.108e-8470.61Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP71_PARBA4.607e-8369.30Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP7X_PIG2.286e-8268.28Heat shock 70 kDa protein (Fragment) OS=Sus scrofa... [more]
HS7C3_DICDI2.286e-8266.08Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP70_BRELC6.652e-8268.42Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_AJECA8.688e-8269.70Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_CLAHE1.936e-8167.98Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]

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Properties
Property NameValue
Genbank descriptionC04011A09SK FlavFr1 Citrus clementina cDNA clone C04011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292144 ID=CX292144; Name=CX292144; organism=Citrus clementina; type=EST; length=684bp
CTCGTGCCGTGCGGACGGCATGTGAGCGGGCTAAGAGGACTCTATCTTCT
ACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACTT
CTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTGT
TCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAATT
GATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAAT
TCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTGT
GCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCAG
GCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGCT
GCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTAA
TGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCAA
ATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGTA
TGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTCG
AGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGTG
TGCTTTGACATTGATGCTAATGGTATATTGCATG
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