CX292144

Overview
NameCX292144
Unique NameCX292144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.528e-81
Identity = 158/227 (69.60%), Postives = 179/227 (78.85%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +R+ACERAKRTLSS++Q +IEIDSLYEG+DFY +ITRARFEELN DLFR  ++PVEK LRD+K+DK Q+HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           ILSG+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVL QVYE   A TKDNNLLGKFELTGIPPA    PQI V FDIDANGI++
Sbjct:  261 RRLRSACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKGQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLNQVYE-VGAMTKDNNLLGKFELTGIPPA-LWCPQIEVTFDIDANGIMN 485
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 2.528e-81
Identity = 152/227 (66.96%), Postives = 176/227 (77.53%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RT CERAKRTLSS++Q TIEIDSL+EGID+  T++RARFEEL +D FR  + PVEK L+D+ +DK  VH+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG+ +  VQD           G+ETAGGVMT LI RNTTIP KK QIF+TY+DNQPGVLIQVYEGERA TKDNNLLGKF L GIPPAPR VPQI V FDIDANGIL+
Sbjct:  274 RRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFEELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSINPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDANGILN 500
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.528e-81
Identity = 152/227 (66.96%), Postives = 176/227 (77.53%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RT CERAKRTLSS++Q TIEIDSL+EGID+  T++RARFEEL +D FR  + PVEK L+D+ +DK  VH+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG+ +  VQD           G+ETAGGVMT LI RNTTIP KK QIF+TY+DNQPGVLIQVYEGERA TKDNNLLGKF L GIPPAPR VPQI V FDIDANGIL+
Sbjct:  274 RRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFEELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSINPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDANGILN 500
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.795e-80
Identity = 150/227 (66.08%), Postives = 178/227 (78.41%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+++ TIEID+L +GID+Y  I+RARFEEL  DLFR  ++PVEK L D+K+DKS +HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD           GIETAGGVMT LI RN+ IP K+ QIFSTY+DNQPGV IQV+EGERA TKDNNLLG+F+L+GIPPAPRGVPQI V FD+DANGIL+
Sbjct:  260 RRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTQIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILN 486
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 8.132e-80
Identity = 147/227 (64.76%), Postives = 177/227 (77.97%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+++ ++EID+L+EGIDFY+ I+RARFEELNMDLFR  M+PVE+ L D+K+DK  +HDVVLVGGSTRIPK+Q+LLQD F GK+L  SINPDE           IL+G G+ ++QD           GIETAGGVMT L+ RN  IP K++QIF+TYSDNQ  V IQVYEGERA TKDNNLLG F LTGIPPAPRGVPQI V FD++A+GIL+
Sbjct:  262 RRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNNLLGTFNLTGIPPAPRGVPQIEVAFDLNADGILN 488
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 8.132e-80
Identity = 149/227 (65.64%), Postives = 178/227 (78.41%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+++ TIEID+L +GID+Y  I+RARFEEL  DLFR  ++PVEK L D+K+DKS +HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD           GIETAGGVMT LI RN+ IP K+ +IFSTY+DNQPGV IQV+EGERA TKDNNLLG+F+L+GIPPAPRGVPQI V FD+DANGIL+
Sbjct:  260 RRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILN 486
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 8.132e-80
Identity = 149/227 (65.64%), Postives = 178/227 (78.41%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS+++ TIEID+L +GID+Y  I+RARFEEL  DLFR  ++PVEK L D+K+DKS +HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD           GIETAGGVMT LI RN+ IP K+ +IFSTY+DNQPGV IQV+EGERA TKDNNLLG+F+L+GIPPAPRGVPQI V FD+DANGIL+
Sbjct:  260 RRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILN 486
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.062e-79
Identity = 153/227 (67.40%), Postives = 176/227 (77.53%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +Q TIEID+L+E IDF ATITRARFEEL  DLFR  ++PVE+ L+D+K+DK  VHDVVLVGGSTRIPKVQ L+ DFF GKEL KSINPDE           IL+G  +++ +            GIETAGGVMT LI RNTTIPTKK QIFSTY+DNQPGV IQV+EGERA TKD +LLG F+L+GIPPAPRGVPQI V FD+DANGIL+
Sbjct:  264 RRLRTACERAKRTLSSATQATIEIDALFENIDFQATITRARFEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILN 490
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.062e-79
Identity = 152/227 (66.96%), Postives = 176/227 (77.53%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTACERAKRTLSS +Q TIEID+L+E +DF ATITRARFEEL  DLFR  ++PVE+ L+D+K+DK  VHDVVLVGGSTRIPKVQ L+ DFF GKEL KSINPDE           IL+G  +++ +            GIETAGGVMT LI RNTTIPTKK QIFSTY+DNQPGV IQV+EGERA TKD +LLG F+L+GIPPAPRGVPQI V FD+DANGIL+
Sbjct:  263 RGLRTACERAKRTLSSATQATIEIDALFENVDFQATITRARFEELCGDLFRSTIQPVERVLQDAKMDKRSVHDVVLVGGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILN 489
[Close]
BLAST of CX292144 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.387e-79
Identity = 146/227 (64.32%), Postives = 178/227 (78.41%), Query Frame = 3 
Query:    3 RAVRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILH 683
            R +RTA ERAKRTLSS++Q  IE+DSL+EGIDFY +I+RARFE+L  DLFRKC+EPVE+ + D+KIDK ++  VVLVGGSTRIPK+Q+LLQ+F NGKEL KSINPDE           ILSG+ +++++D           GIETAGGVM+ +I RNT +PTK  Q F+TYSDNQPGV IQV+EGERA TKDNN LG+FEL+GIPPAPRG P+I V FDIDANGI+H
Sbjct:  261 RRLRTAAERAKRTLSSSAQANIEVDSLFEGIDFYTSISRARFEDLCSDLFRKCLEPVERAILDAKIDKKKIDTVVLVGGSTRIPKIQKLLQEFLNGKELNKSINPDEAVAYGAAVQAAILSGDKSDEIKDVLLVDVAPLSLGIETAGGVMSKIIERNTRVPTKASQTFTTYSDNQPGVSIQVFEGERAMTKDNNRLGQFELSGIPPAPRGRPKIEVSFDIDANGIMH 487
The following BLAST results are available for this feature:
BLAST of CX292144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_ORYLA2.528e-8169.60Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP70_PLAFA2.528e-8166.96Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PLACB2.528e-8166.96Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP74_ANOAL2.795e-8066.08Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP7B_DROME8.132e-8064.76Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP72_ANOAL8.132e-8065.64Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL8.132e-8065.64Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP70_LEIMA1.062e-7967.40Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_LEIDO1.062e-7966.96Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP74_PARLI1.387e-7964.32Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04011A09SK FlavFr1 Citrus clementina cDNA clone C04011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292144 ID=CX292144; Name=CX292144; organism=Citrus clementina; type=EST; length=684bp
CTCGTGCCGTGCGGACGGCATGTGAGCGGGCTAAGAGGACTCTATCTTCT
ACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACTT
CTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTGT
TCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAATT
GATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAAT
TCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTGT
GCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCAG
GCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGCT
GCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTAA
TGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCAA
ATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGTA
TGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTCG
AGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGTG
TGCTTTGACATTGATGCTAATGGTATATTGCATG
back to top