CX292145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAAN (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain N315) GN=sdcS PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36 Identity = 78/208 (37.50%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36 Identity = 78/208 (37.50%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36 Identity = 78/208 (37.50%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAA8 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain NCTC 8325) GN=sdcS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36 Identity = 78/208 (37.50%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAA3 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain USA300) GN=sdcS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36 Identity = 78/208 (37.50%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAAW (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MW2) GN=sdcS PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.137e-36 Identity = 77/208 (37.02%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLF+IP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAAS (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MSSA476) GN=sdcS PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.137e-36 Identity = 77/208 (37.02%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLF+IP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: SDCS_STAAB (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.137e-36 Identity = 77/208 (37.02%), Postives = 121/208 (58.17%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K++LD LG M + EK+V +F + LW+TR + W DGT ++ ++ LLF+IP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T+++P+L ++ + VHPLLLM P A+ A A++LP GTP N + F +G I I+ M G Sbjct: 283 IKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: S13A2_MOUSE (Solute carrier family 13 member 2 OS=Mus musculus GN=Slc13a2 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.137e-36 Identity = 89/227 (39.21%), Postives = 132/227 (58.15%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWG-ALFNDRAG-----DGTASVVMATLLFIIPSM--------KQKGE-----KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 +K + +LGPM+FAEK V +F +L+ LW TR PGWG F ++ G DGT ++ ++ ++FIIPS K+ G+ ++ W K+PWNI++LLG GFA+A G SGL+ L L L+ P A I+ L+ AI TE TSN ATTTL +P+L +A+ + +HPL +M+P + A AF+LP TP N + F+ G +++ DM + G Sbjct: 310 IKTQHRLLGPMSFAEKAVTFLFVLLVVLWFTRE-PGFFPGWGDTAFANKKGQSMVSDGTVAIFISLIMFIIPSKIPGLTEDPKKPGKLKAPPAILTWKTVNDKMPWNILILLGGGFALAKGSEESGLSKWLGDKLTPLQHVPPSATVLILSLLVAIFTECTSNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAG 535
BLAST of CX292145 vs. ExPASy Swiss-Prot
Match: S13A2_HUMAN (Solute carrier family 13 member 2 OS=Homo sapiens GN=SLC13A2 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.218e-36 Identity = 88/227 (38.77%), Postives = 130/227 (57.27%), Query Frame = 1 Query: 43 LKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA------GDGTASVVMATLLFIIPS----MKQKGEK---------LMDWNKC-KKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVVPLLIQIAKTMHVHPLLLMVPGAIGAQFAFLLPTGTPSNIVGFTTGHIEIQDMIKTG 663 ++ E +LGPM FAEK + +F +L+ LW TR GWG L A DGT ++ + ++FIIPS + Q E L+DW +K+PWNI+LLLG G+A+A G SGL++ L L L++ P AIA I+ L+ A TE TSN ATTT+ +P+L +A+ + +HPL +M+P + AF+LP TP N + F+ G +++ DM + G Sbjct: 315 IQTEHRLLGPMTFAEKAISILFVILVLLWFTRE-PGFFLGWGNLAFPNAKGESMVSDGTVAIFIGIIMFIIPSKFPGLTQDPENPGKLKAPLGLLDWKTVNQKMPWNIVLLLGGGYALAKGSERSGLSEWLGNKLTPLQSVPAPAIAIILSLLVATFTECTSNVATTTIFLPILASMAQAICLHPLYVMLPCTLATSLAFMLPVATPPNAIVFSFGDLKVLDMARAG 540 The following BLAST results are available for this feature:
BLAST of CX292145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292145 ID=CX292145; Name=CX292145; organism=Citrus clementina; type=EST; length=729bpback to top |