CX292147

Overview
NameCX292147
Unique NameCX292147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACOC_MOUSE (Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.308e-54
Identity = 106/180 (58.89%), Postives = 128/180 (71.11%), Query Frame = 3
Query:   12 MFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            MF D+N+  Q+  ++  +EL+L  V PC SGPKRP D+V + EMK D+ SCL  K GFKGF V  +       F ++     L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA E GL VKP++KTSL+PGSGVVT YL +SG+  YL++ GF +VGYGC TCIGNSG L E    AI
Sbjct:  342 MFRDFNDTSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSEMKKDFESCLGAKQGFKGFQVAPDRHNDRKTFLYNNSEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVEAGLSVKPYIKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAI 521          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACOC_HUMAN (Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 4.970e-54
Identity = 105/180 (58.33%), Postives = 127/180 (70.56%), Query Frame = 3
Query:   12 MFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            MF D+N+P Q+  ++  +EL+L  V PC SGPKRP D+V + +MK D+ SCL  K GFKGF V  E       F +      L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA + GL V P++KTSL+PGSGVVT YL +SG+  YL++ GF +VGYGC TCIGNSG L E    AI
Sbjct:  342 MFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAI 521          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACOC_BOVIN (Cytoplasmic aconitate hydratase OS=Bos taurus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.888e-53
Identity = 103/180 (57.22%), Postives = 128/180 (71.11%), Query Frame = 3
Query:   12 MFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            MF D+++  Q+  ++  +EL+L  V PC SGPKRP D+V + +MK D+ SCL  K GFKGF V  +       F ++     L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA + GL VKP++KTSL+PGSGVVT YL +SG+  YL++ GF +VGYGC TCIGNSG L E    AI
Sbjct:  342 MFRDFSDSSQDPDFAQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPDHHNDHKTFIYNNSKFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLSVKPYIKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEAVVEAI 521          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACOC_RAT (Cytoplasmic aconitate hydratase OS=Rattus norvegicus GN=Aco1 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 5.495e-53
Identity = 104/180 (57.78%), Postives = 128/180 (71.11%), Query Frame = 3
Query:   12 MFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            MF D+++  Q+  ++  +EL+L  V PC SGPKRP D+V + E++ D+ SCL  K GFKGF V  +       F ++     L HGSVVIAAITSCTNTSNPSVMLGAGL+AKKA E GL VKP+VKTSL+PGSGVVT YL +SG+  YL++ GF +VGYGC TCIGNSG L E    AI
Sbjct:  342 MFRDFSDSSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSEIEKDFESCLGAKQGFKGFQVAPDHHNDHKTFIYNDSEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVEAGLNVKPYVKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAI 521          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACOC_DICDI (Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.727e-52
Identity = 99/172 (57.56%), Postives = 128/172 (74.42%), Query Frame = 3
Query:   36 QQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            Q   ++++ +EL+L+ V P +SGPKRPHDR+ L  MK D++SCL + VGFKGF +  +  +K   F+F  +   + HG+V IAAITSCTNTSNPSVMLGAGL+AK A E GL+V P++KTSL+PGSGVVT+Y   SGLQ+ LN+ GF + GYGC TCIGNSG+L E  A AI
Sbjct:  351 QSHPIFTTTMELDLSTVVPSLSGPKRPHDRISLNSMKQDFNSCLSSPVGFKGFGLTADQIQKKATFTFKDKQYTIGHGAVTIAAITSCTNTSNPSVMLGAGLLAKNAVEHGLEVAPYIKTSLSPGSGVVTEYFSHSGLQEPLNKLGFDLTGYGCMTCIGNSGELAEPLAEAI 522          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: IREB2_PIG (Iron-responsive element-binding protein 2 OS=Sus scrofa GN=IREB2 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.036e-51
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = 3
Query:    3 ANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            A K+F +  +   E  YS  +++NL  + P +SGPKRP DRV + +MK+D+ +CL+ KVGFKGF +  E Q   V   + G   +L HGSVVIAA+ SCTN  NPSVML AGL+AKKA E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L E   +A+
Sbjct:  415 AVKLFRNDQDNSGEPEYSQVIQINLNSIVPSVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQIAAEKQNDTVSIHYEGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEAGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEIVGYGCSTCVGNTAPLSEAVLNAV 597          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: IREB2_HUMAN (Iron-responsive element-binding protein 2 OS=Homo sapiens GN=IREB2 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.036e-51
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 3
Query:    3 ANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            A K+F +      E  YS  +++NL  + P +SGPKRP DRV + +MK+D+ +CL+ KVGFKGF +  E Q+ +V   + G   +L HGSVVIAA+ SCTN  NPSVML AGL+AKKA E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L +   +A+
Sbjct:  414 AVKLFRNDQNSSGEPEYSQVIQINLNSIVPSVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQIAAEKQKDIVSIHYEGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEAGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEIVGYGCSTCVGNTAPLSDAVLNAV 596          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: IREB2_MOUSE (Iron-responsive element-binding protein 2 OS=Mus musculus GN=Ireb2 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.496e-50
Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 3
Query:   27 NEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            +E   E  YS  +++NL  +   +SGPKRP DRV + +MK+D+ +CL+ KVGFKGF V  E Q   V   + G   +L HGSVVIAA+ SCTN  NPSVML AGL+AKKA E+GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L E   +A+
Sbjct:  422 DENSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVAAEKQSDTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAV 596          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: IREB2_RAT (Iron-responsive element-binding protein 2 OS=Rattus norvegicus GN=Ireb2 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 2.552e-50
Identity = 94/175 (53.71%), Postives = 124/175 (70.86%), Query Frame = 3
Query:   27 NEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            +E   E  YS  +++NL  +   +SGPKRP DRV + +MK+D+ +CL+ KVGFKGF V  E Q   V   + G   +L HGSVVIAA+ SCTN  NPSVML AGL+AKKA E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF IVGYGC+TC+GN+  L E   +A+
Sbjct:  422 DENSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVAAEKQSDTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVETGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEIVGYGCSTCVGNTAPLSEAILNAV 596          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: IREB2_CHICK (Iron-responsive element-binding protein 2 OS=Gallus gallus GN=IREB2 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.686e-49
Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 3
Query:    3 ANKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            A K+F +     +E  YS  ++++L+ + P +SGPKR  DRV +  MK+D+ +CL+ K G KGF +  E Q  VV   + G   EL HG VVIAA+ SCTN  NPSVML AGL+AKKA E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF +VGYGC+TC+GN+  L E   +AI
Sbjct:  416 AVKLFRNGESSSREPEYSQVVQISLSSIIPHVSGPKRSQDRVAVNNMKSDFQTCLNEKAGVKGFQIAAEKQNDVVPVQYEGNQYELSHGCVVIAAVISCTNNCNPSVMLAAGLLAKKAVEAGLEVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEVVGYGCSTCVGNTAPLPEAIRNAI 598          
The following BLAST results are available for this feature:
BLAST of CX292147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACOC_MOUSE1.308e-5458.89Cytoplasmic aconitate hydratase OS=Mus musculus GN... [more]
ACOC_HUMAN4.970e-5458.33Cytoplasmic aconitate hydratase OS=Homo sapiens GN... [more]
ACOC_BOVIN1.888e-5357.22Cytoplasmic aconitate hydratase OS=Bos taurus GN=A... [more]
ACOC_RAT5.495e-5357.78Cytoplasmic aconitate hydratase OS=Rattus norvegic... [more]
ACOC_DICDI2.727e-5257.56Probable cytoplasmic aconitate hydratase OS=Dictyo... [more]
IREB2_PIG1.036e-5152.46Iron-responsive element-binding protein 2 OS=Sus s... [more]
IREB2_HUMAN1.036e-5151.91Iron-responsive element-binding protein 2 OS=Homo ... [more]
IREB2_MOUSE1.496e-5053.71Iron-responsive element-binding protein 2 OS=Mus m... [more]
IREB2_RAT2.552e-5053.71Iron-responsive element-binding protein 2 OS=Rattu... [more]
IREB2_CHICK3.686e-4950.82Iron-responsive element-binding protein 2 OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionC04011B01SK FlavFr1 Citrus clementina cDNA clone C04011B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292147 ID=CX292147; Name=CX292147; organism=Citrus clementina; type=EST; length=552bp
GAGCAAATAAAATGTTTGTCGACTACAATGAGCCCCAACAAGAAAGGGTG
TACTCATCATACCTAGAATTGAACCTTGCTGATGTTGAGCCTTGTATTTC
GGGACCAAAGAGACCTCATGATCGGGTTCCCTTGAAGGAAATGAAGGCAG
ATTGGCATTCATGTCTTGACAATAAAGTCGGCTTCAAGGGCTTTGCTGTA
CCTAAAGAGACACAGGAAAAAGTGGTCAAGTTTTCATTCCATGGACAGCC
AGCAGAGCTTAAGCACGGGAGTGTCGTGATTGCTGCAATCACAAGTTGCA
CCAATACATCAAACCCCAGTGTTATGCTTGGTGCTGGTCTTGTTGCCAAA
AAGGCTTGTGAACTTGGTTTGCAGGTCAAGCCATGGGTTAAAACAAGTCT
TGCCCCAGGCTCAGGAGTTGTTACTAAATATTTACTCCAGAGTGGACTGC
AAAAATATTTAAATGAGCAAGGATTCCATATTGTTGGATATGGATGCACA
ACATGTATTGGAAATTCAGGGGATCTGGATGAAATCTGTGCATCTGCTAT
TA
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