CX292147

Overview
NameCX292147
Unique NameCX292147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: IREB2_XENLA (Iron-responsive element-binding protein 2 OS=Xenopus laevis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.401e-48
Identity = 92/174 (52.87%), Postives = 120/174 (68.97%), Query Frame = 3
Query:   30 EPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            E  Q+ +YS  L++NL  + P +SGPKRP DR+ + +MK D+ +CL  K G KGF +P+E Q  +V  ++      L HG VVIAA+TSCTN  NPSVML AGL+AKKA E GL VKP++KTSL+PGSG VT YL  SG+  YL++ GF I+GYGC  C+GN+  L E   +AI
Sbjct:  415 ENVQQPLYSKVLQINLNSIVPYVSGPKRPQDRISVMDMKKDFETCLKEKTGLKGFQIPEEKQNIMVPVTYGNSEYSLSHGCVVIAAVTSCTNNCNPSVMLTAGLLAKKAVEAGLTVKPYIKTSLSPGSGTVTYYLSASGVLPYLSKLGFDIIGYGCARCVGNTNPLPESIVTAI 588          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: IREB2_XENTR (Iron-responsive element-binding protein 2 OS=Xenopus tropicalis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.120e-48
Identity = 91/174 (52.30%), Postives = 120/174 (68.97%), Query Frame = 3
Query:   30 EPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            E  Q+  YS  L++NL  + P +SGPKRP DR+ + +MK D+ +CL+ K G KGF +P++ Q  +V  ++      L HG VVIAA+TSCTN  NPSVML AGL+AKKA E GL VKP++KTSL+PGSG VT YL  SG+  YL++ GF I+GYGC  C+GN+  L E   +AI
Sbjct:  417 ENVQQPEYSKVLQINLNSIVPYVSGPKRPQDRISVMDMKKDFEACLNEKTGLKGFQIPEKKQSIMVPVTYENSEYSLSHGCVVIAAVTSCTNNCNPSVMLTAGLLAKKAVEAGLTVKPYIKTSLSPGSGTVTYYLSASGVLPYLSKLGFDIIGYGCARCVGNTNPLPESIVTAI 590          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_LEGPH (Aconitate hydratase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=acn PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 9.394e-45
Identity = 93/170 (54.71%), Postives = 121/170 (71.18%), Query Frame = 3
Query:   24 YNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDE 533
            Y++  +E V++  L L+L  VEP ++GPKRP D+V L  +  ++++ L          V KE +EK   F+   +  ++KHG VVIAAITSCTNTSNPSV++ AGLVAKKA E GLQ KPWVK+SLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L +
Sbjct:  353 YDKDNEEPVFTDSLHLDLGSVEPSLAGPKRPQDKVNLSSLPVEFNNFL--------IEVGKE-KEKEKTFAVKNKDFQMKHGHVVIAAITSCTNTSNPSVLMAAGLVAKKAIEKGLQRKPWVKSSLAPGSKVVTDYLRHAGLQTYLDQLGFNLVGYGCTTCIGNSGPLPD 513          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_FRATH (Aconitate hydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=acn PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.093e-44
Identity = 94/173 (54.34%), Postives = 121/173 (69.94%), Query Frame = 3
Query:   33 PQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            P +E  YS+ +E++L++VE  ++GPKRP DRV   +MK  +   L ++ G  GF +  E  +K  +    G    + HGSV IAAITSCTNTSNPS++LGAGL+AKKA E GL+VKP+VKTSLAPGS VVT+YL ++ L   L   GF++VGYGCTTCIGNSG LDE    AI
Sbjct:  353 PAEEPEYSNIVEIDLSEVESNLAGPKRPQDRVAFHDMKKAFAEALVHEQGLHGFGLTDEQLQKSAEVK--GLNERITHGSVAIAAITSCTNTSNPSLLLGAGLLAKKANEKGLKVKPFVKTSLAPGSQVVTQYLEKANLLPELENLGFNLVGYGCTTCIGNSGPLDEPVVEAI 523          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_BACSU (Aconitate hydratase OS=Bacillus subtilis GN=citB PE=1 SV=4)

HSP 1 Score: 176.407 bits (446), Expect = 7.953e-44
Identity = 89/177 (50.28%), Postives = 121/177 (68.36%), Query Frame = 3
Query:   24 YNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSF-HGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDEICASAI 551
            Y    ++  ++  +E++L+ +E  +SGPKRP D +PL  M+  +   L +  G +GF +  E + K +KF   +G+   +K G++ IAAITSCTNTSNP V++GAGLVAKKA ELGL+V  +VKTSLAPGS VVT YL+ SGL  Y+ E GF++VGYGCTTCIGNSG L      A+
Sbjct:  358 YTPDAEDPQFTDVVEIDLSQIEANLSGPKRPQDLIPLSAMQETFKKQLVSPAGNQGFGLNAEEENKEIKFKLLNGEETVMKTGAIAIAAITSCTNTSNPYVLIGAGLVAKKAVELGLKVPNYVKTSLAPGSKVVTGYLVNSGLLPYMKELGFNLVGYGCTTCIGNSGPLSPEIEEAV 534          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_STAES (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=acnA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.039e-43
Identity = 93/175 (53.14%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    6 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFH-GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDL 527
            N MF D  +   E  Y+  ++L+L+ VE  +SGPKRP D + L +MK ++   +    G +G  + +   +K  + +F+ G  A +K G + IAAITSCTNTSNP VMLGAGLVAKKA E GL+V  +VKTSLAPGS VVT YL  SGLQ+YL++ GF++VGYGCTTCIGNSG L
Sbjct:  347 NHMFFDVEKEDPE--YTDVIDLDLSTVEASLSGPKRPQDLIFLSDMKKEFEKSVTAPAGNQGHGLDQSEFDKKAEINFNDGSKATMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEFVKTSLAPGSKVVTGYLRDSGLQQYLDDLGFNLVGYGCTTCIGNSGPL 519          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_STAEQ (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=acnA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.039e-43
Identity = 93/175 (53.14%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    6 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFH-GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDL 527
            N MF D  +   E  Y+  ++L+L+ VE  +SGPKRP D + L +MK ++   +    G +G  + +   +K  + +F+ G  A +K G + IAAITSCTNTSNP VMLGAGLVAKKA E GL+V  +VKTSLAPGS VVT YL  SGLQ+YL++ GF++VGYGCTTCIGNSG L
Sbjct:  347 NHMFFDVEKEDPE--YTDVIDLDLSTVEASLSGPKRPQDLIFLSDMKKEFEKSVTAPAGNQGHGLDQSEFDKKAEINFNDGSKATMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEFVKTSLAPGSKVVTGYLRDSGLQQYLDDLGFNLVGYGCTTCIGNSGPL 519          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_STAAW (Aconitate hydratase OS=Staphylococcus aureus (strain MW2) GN=acnA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.772e-43
Identity = 93/175 (53.14%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    6 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFH-GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDL 527
            N MF D  +  ++  Y+  +EL+L+ VE  +SGPKRP D + L +MK+ + + +    G +G  + K   +K  + +F  G  A +K G + IAAITSCTNTSNP VMLGAGLVAKKA E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L
Sbjct:  347 NHMFFDVEK--EDPNYTDVIELDLSTVEASLSGPKRPQDLIFLSDMKSSFENSVTAPAGNQGHGLDKSEFDKKAEINFKDGSKATMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYGCTTCIGNSGPL 519          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_STAAS (Aconitate hydratase OS=Staphylococcus aureus (strain MSSA476) GN=acnA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.772e-43
Identity = 93/175 (53.14%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    6 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFH-GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDL 527
            N MF D  +  ++  Y+  +EL+L+ VE  +SGPKRP D + L +MK+ + + +    G +G  + K   +K  + +F  G  A +K G + IAAITSCTNTSNP VMLGAGLVAKKA E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L
Sbjct:  347 NHMFFDVEK--EDPNYTDVIELDLSTVEASLSGPKRPQDLIFLSDMKSSFENSVTAPAGNQGHGLDKSEFDKKAEINFKDGSKATMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYGCTTCIGNSGPL 519          
BLAST of CX292147 vs. ExPASy Swiss-Prot
Match: ACON_STAAN (Aconitate hydratase OS=Staphylococcus aureus (strain N315) GN=acnA PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.772e-43
Identity = 93/175 (53.14%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    6 NKMFVDYNEPQQERVYSSYLELNLADVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAVPKETQEKVVKFSFH-GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDL 527
            N MF D  +  ++  Y+  +EL+L+ VE  +SGPKRP D + L +MK+ + + +    G +G  + K   +K  + +F  G  A +K G + IAAITSCTNTSNP VMLGAGLVAKKA E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L
Sbjct:  347 NHMFFDVEK--EDPNYTDVIELDLSTVEASLSGPKRPQDLIFLSDMKSSFENSVTAPAGNQGHGLDKSEFDKKAEINFKDGSKATMKTGDIAIAAITSCTNTSNPYVMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYGCTTCIGNSGPL 519          
The following BLAST results are available for this feature:
BLAST of CX292147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
IREB2_XENLA1.401e-4852.87Iron-responsive element-binding protein 2 OS=Xenop... [more]
IREB2_XENTR3.120e-4852.30Iron-responsive element-binding protein 2 OS=Xenop... [more]
ACON_LEGPH9.394e-4554.71Aconitate hydratase OS=Legionella pneumophila subs... [more]
ACON_FRATH2.093e-4454.34Aconitate hydratase OS=Francisella tularensis subs... [more]
ACON_BACSU7.953e-4450.28Aconitate hydratase OS=Bacillus subtilis GN=citB P... [more]
ACON_STAES1.039e-4353.14Aconitate hydratase OS=Staphylococcus epidermidis ... [more]
ACON_STAEQ1.039e-4353.14Aconitate hydratase OS=Staphylococcus epidermidis ... [more]
ACON_STAAW1.772e-4353.14Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAS1.772e-4353.14Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAN1.772e-4353.14Aconitate hydratase OS=Staphylococcus aureus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC04011B01SK FlavFr1 Citrus clementina cDNA clone C04011B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292147 ID=CX292147; Name=CX292147; organism=Citrus clementina; type=EST; length=552bp
GAGCAAATAAAATGTTTGTCGACTACAATGAGCCCCAACAAGAAAGGGTG
TACTCATCATACCTAGAATTGAACCTTGCTGATGTTGAGCCTTGTATTTC
GGGACCAAAGAGACCTCATGATCGGGTTCCCTTGAAGGAAATGAAGGCAG
ATTGGCATTCATGTCTTGACAATAAAGTCGGCTTCAAGGGCTTTGCTGTA
CCTAAAGAGACACAGGAAAAAGTGGTCAAGTTTTCATTCCATGGACAGCC
AGCAGAGCTTAAGCACGGGAGTGTCGTGATTGCTGCAATCACAAGTTGCA
CCAATACATCAAACCCCAGTGTTATGCTTGGTGCTGGTCTTGTTGCCAAA
AAGGCTTGTGAACTTGGTTTGCAGGTCAAGCCATGGGTTAAAACAAGTCT
TGCCCCAGGCTCAGGAGTTGTTACTAAATATTTACTCCAGAGTGGACTGC
AAAAATATTTAAATGAGCAAGGATTCCATATTGTTGGATATGGATGCACA
ACATGTATTGGAAATTCAGGGGATCTGGATGAAATCTGTGCATCTGCTAT
TA
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