CX292148

Overview
NameCX292148
Unique NameCX292148
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC4 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain B4264) GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.167e-74
Identity = 138/231 (59.74%), Postives = 178/231 (77.06%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L E AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG+++++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAKLCGAEPAGVICEIINEDGTMARVPDLIECAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFHAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQSLRLLTNNPRKIAGLQGYDLEVIERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC3 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain 03BB102) GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.167e-74
Identity = 137/231 (59.31%), Postives = 177/231 (76.62%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L + AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFQAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC0 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain AH820) GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.167e-74
Identity = 137/231 (59.31%), Postives = 177/231 (76.62%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L + AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFQAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAN (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.167e-74
Identity = 137/231 (59.31%), Postives = 177/231 (76.62%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L + AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFQAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAH (Riboflavin biosynthesis protein ribBA OS=Bacillus thuringiensis (strain Al Hakam) GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.167e-74
Identity = 137/231 (59.31%), Postives = 177/231 (76.62%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L + AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFQAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAC (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.167e-74
Identity = 137/231 (59.31%), Postives = 177/231 (76.62%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L + AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFQAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAA (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis (strain A0248) GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.167e-74
Identity = 137/231 (59.31%), Postives = 177/231 (76.62%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L + AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFQAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC2 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain G9842) GN=ribBA PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.197e-73
Identity = 138/231 (59.74%), Postives = 178/231 (77.06%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L E AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG+++++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAKLCGAEPAGVICEIINEDGTMARVPDLIECAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFHAIGYSNSLDTKEHIALVKGDISIGEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQSLRLLTNNPRKIAGLQGYDLEVVERVPL 372
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_PELPB (Riboflavin biosynthesis protein ribBA OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ribBA PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.564e-73
Identity = 137/231 (59.31%), Postives = 173/231 (74.89%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA LAG  P  +LCE+++DDGSMARLP+L +   +  LK+I+I +L+ Y+ +R+KLV R+  +R+PT++G F    Y S  D   H+A VKGD+   + +LVRVHS+C TGD F S RCDCG+QLA A+  IE  GRGVL+YL   EGRGIGL +KL+AYNLQD G DTVEANE+LG   D R+YGIGAQ+L+DLGVR MKLMTNNP K VGL+GYGL +  RVPL
Sbjct:  149 EAAVDLARLAGCSPTGLLCEILNDDGSMARLPQLIKLKAKFGLKLITIKELVAYQMQRNKLVQRAVESRLPTIYGEFRLIAYESFTDQHNHMAFVKGDVTTDEPVLVRVHSQCATGDTFASLRCDCGNQLASALTMIEKEGRGVLIYLM-QEGRGIGLINKLKAYNLQDQGYDTVEANEKLGFKADLRDYGIGAQILKDLGVRKMKLMTNNPKKVVGLEGYGLEIVERVPL 378
[Close]
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCQ (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain Q1) GN=ribBA PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.042e-73
Identity = 137/231 (59.31%), Postives = 176/231 (76.19%), Query Frame = 2 
Query:    2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694
            EA+VDLA L G +PA V+CE++++DG+MAR+P L + AK+ ++K+I+I DLI YRR  + LV R     +PT +G F A  Y + LD  EHIA+VKGDI  G  +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL
Sbjct:  143 EAAVDLAQLCGAEPAGVICEIINEDGTMARVPDLLQCAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFHAIGYSNSLDSKEHIALVKGDISTGDPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLEVIERVPL 372
The following BLAST results are available for this feature:
BLAST of CX292148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 285
Match NameE-valueIdentityDescription
RIBBA_BACC49.167e-7459.74Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC39.167e-7459.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC09.167e-7459.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAN9.167e-7459.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAH9.167e-7459.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAC9.167e-7459.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAA9.167e-7459.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC21.197e-7359.74Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_PELPB1.564e-7359.31Riboflavin biosynthesis protein ribBA OS=Pelodicty... [more]
RIBBA_BACCQ2.042e-7359.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]

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Properties
Property NameValue
Genbank descriptionC04011B02SK FlavFr1 Citrus clementina cDNA clone C04011B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292148 ID=CX292148; Name=CX292148; organism=Citrus clementina; type=EST; length=702bp
AGAAGCTTCTGTTGATCTTGCTGTGCTAGCTGGATTTGACCCTGCAGCAG
TTTTGTGTGAGGTTGTGGATGATGATGGTTCCATGGCTAGATTACCAAAG
CTTCGTGAATTTGCTAAGAGGGAAAATTTAAAAATTATATCAATTGCTGA
TTTAATAAGGTATAGGAGGAAGAGAGATAAACTAGTAGATCGTTCTTCTG
CTGCAAGGATACCTACGATGTGGGGTCCATTTACTGCTTACTGTTACAGA
TCAATTTTGGATGGAATTGAGCATATAGCAATGGTTAAGGGTGACATTGG
GGATGGACAAGATATTCTTGTGAGAGTGCACTCAGAGTGTCTCACTGGAG
ATATATTTGGATCAGCCAGATGTGATTGTGGTGATCAGCTTGCACTTGCA
ATGCAGCAGATTGAGGCTGCTGGCAGGGGTGTATTAGTTTATCTCCGTGG
TCATGAGGGAAGGGGCATTGGTTTAGGCCACAAGCTTCGCGCTTATAACT
TGCAGGACGATGGGCGTGATACAGTTGAAGCAAATGAGGAATTGGGATTG
CCTGTTGACTCACGGGAATATGGCATTGGTGCACAGATGCTAAGGGATCT
TGGTGTTCGAACAATGAAGCTGATGACAAACAACCCTTCGAAGTATGTTG
GACTCAAGGGTTATGGTTTGGCTGTTGCAGGAAGGGTTCCCCTATAACTC
CC
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