CX292148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_CYTH3 (Riboflavin biosynthesis protein ribBA OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ribBA PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.188e-66 Identity = 125/231 (54.11%), Postives = 162/231 (70.13%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA LAGF PA VL E++ +DGSMARLP+L++ A + NLK+ISI DLI YR + LV R +PT G F +R I G H+A++KG + ++VRVHS C+TGDIFGS RCDCG QL AM+ I+ G+GV++Y+ EGRGIGL +KL+AY LQ+ GRDTVEAN ELG +D R+YG GAQ+LRDL + ++L+TNNP K L GYGL + VP+ Sbjct: 149 EAAVDLARLAGFKPAGVLIEIMSEDGSMARLPELKQIATKFNLKLISIKDLIEYRLTHESLVKREIGVDMPTNLGDFDLIAFRQISTGEVHLALIKGTWEKDEPVMVRVHSSCVTGDIFGSCRCDCGPQLHKAMEMIQQEGKGVILYM-NQEGRGIGLLNKLKAYKLQEQGRDTVEANLELGFKMDQRDYGTGAQILRDLNISKLRLITNNPVKRAALAGYGLEITEAVPI 378
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_CORAM (Riboflavin biosynthesis protein ribBA OS=Corynebacterium ammoniagenes GN=ribBA PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.673e-65 Identity = 122/236 (51.69%), Postives = 169/236 (71.61%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVV--DDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKG---DIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA++DLA LAG PA VLCE+V +D +MAR +LR F+ +LK+ISI LI +RR + V R+ ++PT +G FTA Y+ +DG EH+A++ G ++ +D+ VRVHSECLTGD+F S RCDCG QL +M+ I+ AG+G+++YLRGHEGRGIGL KL+AY+LQD G DTV+AN E GLP D+REY + Q+LRDLG+++ L+TNNP K GL+G+G+ + P+ Sbjct: 152 EAAIDLARLAGLRPAGVLCEIVSEEDPTTMARSEELRRFSDEHDLKMISIEQLIEWRRHNETQVRRTVETQLPTDFGSFTALGYKHEIDGQEHVALIAGGVEELNGAEDVFVRVHSECLTGDVFHSRRCDCGQQLHQSMEIIQEAGQGIIIYLRGHEGRGIGLLAKLKAYSLQDSGLDTVDANLEQGLPEDAREYSVAGQILRDLGIKSANLLTNNPHKGEGLRGFGVEASAHTPV 387
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLTR (Riboflavin biosynthesis protein ribBA OS=Chlamydia trachomatis GN=ribBA PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.492e-65 Identity = 121/231 (52.38%), Postives = 167/231 (72.29%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA++DL LAG P + E+V+ D SM R ++ FA++ +L +I++ DLI YR D LV + S+AR+PT +G F+ + Y SI+DG +H A+VKGDI + + + VRVHSECLTGDI GS RCDCG QL +AM+ I G GV+VYLRG EGRGIG GHK+RAY LQD G DTV+AN +LG P+D+REYG+ AQ+L+DL + +++L+T+NP K+ L+ G+ V R+ L Sbjct: 150 EAAMDLMRLAGMQPCGIFAELVNPDHSMMRQQQVLAFAEQHDLTVITVDDLITYRYTYDSLVTKISSARLPTKYGDFSIHVYESIIDGTQHFALVKGDIHEQEAVPVRVHSECLTGDILGSCRCDCGAQLDMAMRYIAEEGLGVIVYLRGQEGRGIGFGHKIRAYALQDLGYDTVDANLQLGFPIDAREYGMAAQVLKDLQLTSVRLITHNPRKFFELQRLGIHVLDRIIL 380
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLMU (Riboflavin biosynthesis protein ribBA OS=Chlamydia muridarum GN=ribBA PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.956e-65 Identity = 120/231 (51.95%), Postives = 165/231 (71.43%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EAS+DL LAG P + E+V+ D SM R ++ +FA++ +I++ DLI YR D LV+ S+ARIPT +G F + Y+SI+DG EH A+VKGDI + + + VRVHSECLTGD+ GS RCDCG QL +AM+ I G GV+VYLRG EGRGIG GHK++AY LQD G DTVEAN +L P+D+REYG+ AQ+L+DL + +++L+T+NP K+ L+ G+ + R+ L Sbjct: 150 EASMDLMRLAGMYPCGIFAELVNADHSMMRQQQILDFAEQHGFTVITVDDLITYRWTFDSLVEHVSSARIPTKYGEFFIHVYKSIIDGTEHFALVKGDIREQESVPVRVHSECLTGDVLGSCRCDCGAQLDMAMRYIAEQGLGVIVYLRGQEGRGIGFGHKIQAYALQDLGYDTVEANLQLSFPIDAREYGVAAQILKDLRLTSVRLITHNPKKFFELQRLGIHILDRIVL 380
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_PORGI (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis GN=ribBA PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.016e-64 Identity = 122/231 (52.81%), Postives = 165/231 (71.43%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA L G PAA L E++++DG+MARLP+L E +KR LKII+I DLI YR K++ +V++ +PT +G F +R +G+EHIA+ KG + + ILVR+HS C TGDIFGS RCDCG QL AM++IE G+G ++YL EGRGIGL K++AY LQ+ G DT++AN LG D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL + +PL Sbjct: 149 EAAVDLARLCGMQPAAALIEIINEDGTMARLPQLWEVSKRFGLKIIAIKDLIAYRLKQESIVEKGVEVDMPTEYGHFRLIPFRQKSNGLEHIALFKGTWDENEPILVRMHSSCATGDIFGSMRCDCGGQLLQAMEKIEKEGKGAIIYL-NQEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPL 378
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_PORG3 (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=ribBA PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.016e-64 Identity = 122/231 (52.81%), Postives = 165/231 (71.43%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA L G PAA L E++++DG+MARLP+L E +KR LKII+I DLI YR K++ +V++ +PT +G F +R +G+EHIA+ KG + + ILVR+HS C TGDIFGS RCDCG QL AM++IE G+G ++YL EGRGIGL K++AY LQ+ G DT++AN LG D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL + +PL Sbjct: 149 EAAVDLARLCGMQPAAALIEIINEDGTMARLPQLWEVSKRFGLKIIAIKDLIAYRLKQESIVEKGVEVDMPTEYGHFRLIPFRQKSNGLEHIALFKGTWDENEPILVRMHSSCATGDIFGSMRCDCGGQLLQAMEKIEKEGKGAIIYL-NQEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPL 378
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_PARD8 (Riboflavin biosynthesis protein ribBA OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ribBA PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.016e-64 Identity = 124/231 (53.68%), Postives = 165/231 (71.43%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA LAG PA L E++++DG+MARLP+L E AK+ ++KII I DLI YR + + +V+ +PT +G F +R +G+EHIA++KG + ILVRVHS C TGDIFGS RC+CG+QL AM++I+ G+GV+VYL EGRGIGL K++AY LQ+DG DTV+AN LG D R+YG+GAQ+LR +GV M+LM+NNP K VGL+ YGL V VP+ Sbjct: 149 EAAVDLARLAGLYPAGALIEIINEDGTMARLPQLIEVAKKFDIKIICIKDLIAYRLRTESIVENGVEVDLPTEYGHFRLIPFRQKSNGLEHIALIKGKFEKDEPILVRVHSSCATGDIFGSMRCECGEQLHEAMRRIDQEGKGVIVYL-NQEGRGIGLMEKMKAYKLQEDGLDTVDANLHLGHQADERDYGVGAQILRHIGVTKMRLMSNNPVKRVGLEAYGLEVVENVPI 378
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_BACTN (Riboflavin biosynthesis protein ribBA OS=Bacteroides thetaiotaomicron GN=ribBA PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.016e-64 Identity = 125/231 (54.11%), Postives = 162/231 (70.13%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA++D+A LAG PA L E++ DDG+MARLP+LR A LK+ISI DLI YR K++ +V++ +PT G F +R +G+EH+A+ KG + + ILVRVHS C TGDI GS RCDCG+QL AM+ IE G+GV+VYL EGRGIGL K++AY LQ+DG DTV+AN LG D R+YG+GAQ+LR+LGV MKL+TNNP K VGL+ YGL + VP+ Sbjct: 148 EATIDMARLAGLYPAGALMEIMSDDGTMARLPELRAMADEHGLKLISIHDLIAYRLKQESIVEKGVEVNMPTEHGMFRLIPFRQKSNGLEHMAIFKGTWNEDEPILVRVHSSCATGDILGSHRCDCGEQLHKAMEMIEKEGKGVVVYL-NQEGRGIGLMEKMKAYKLQEDGMDTVDANLCLGHLADERDYGVGAQILRELGVHKMKLLTNNPVKRVGLEAYGLEIVENVPV 377
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_UNCTG (Riboflavin biosynthesis protein ribBA OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=ribBA PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.123e-63 Identity = 118/231 (51.08%), Postives = 165/231 (71.43%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDL LAGF PA ++CE++++DG+MAR+ L +FAK+ +L II+I +L+ YRR+ +K + +PT +G F + ++ HIA+VKG + + Q++LVRVHS C TGDIF S RCDCGDQL A++ + A +GV++Y+ EGRGIGL +KL+AY LQ+ G DTVEAN+ LG D R+YGIGAQML +LG++++ LMTNNP K GL+ YGL + RVPL Sbjct: 148 EAAVDLVRLAGFYPAGIICEIMNNDGTMARMSDLIKFAKKHDLHIITIGELVNYRRRTEKFISEIVNVDLPTRYGDFKLVLFEDLITKDSHIAVVKGVVKNRQNVLVRVHSSCETGDIFHSLRCDCGDQLETALKAVGEAEQGVVLYIH-QEGRGIGLANKLKAYRLQEKGMDTVEANKALGFDPDLRDYGIGAQMLSELGIKSINLMTNNPGKINGLESYGLKITKRVPL 377
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_ARCFU (GTP cyclohydrolase-2 OS=Archaeoglobus fulgidus GN=ribA PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.969e-57 Identity = 114/226 (50.44%), Postives = 158/226 (69.91%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPT-MWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAV 676 EA VDLA +AGF P+AV ++ +G +A +FAK ++ + I D+I +R K +K+V+R A +PT +G F A Y++ L I +A+VKG + +G D+LVR+HSECLTGD+F S RCDCGDQL A++ I+ G+GV +Y+RGHEGRGIGL +KL AY LQ++G+DTV+AN ELG P D R YGI AQ+L DL V++++L+TNNP K LK YG + Sbjct: 124 EACVDLARMAGFAPSAVYAPLMTAEGGVAGEDYALKFAKEHSMPVFRIKDMIEFRIKSEKIVERVIEATLPTKFYGTFRAVGYKTPLGEI--VALVKGRVDEG-DVLVRIHSECLTGDVFHSLRCDCGDQLENALKMIDREGKGVAIYMRGHEGRGIGLINKLMAYKLQEEGKDTVDANIELGFPPDMRSYGIAAQILMDLKVKSIRLLTNNPLKIEELKKYGFKI 346 The following BLAST results are available for this feature:
BLAST of CX292148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 285
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292148 ID=CX292148; Name=CX292148; organism=Citrus clementina; type=EST; length=702bpback to top |