CX292148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAW (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MW2) GN=ribBA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.231e-50 Identity = 105/229 (45.85%), Postives = 152/229 (66.38%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRV 688 EA+VDLA L G PA V+CE+++DDG+MA+ L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ Sbjct: 144 EAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERI 368
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAS (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MSSA476) GN=ribBA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.231e-50 Identity = 105/229 (45.85%), Postives = 152/229 (66.38%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRV 688 EA+VDLA L G PA V+CE+++DDG+MA+ L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ Sbjct: 144 EAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERI 368
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAR (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MRSA252) GN=ribBA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.231e-50 Identity = 105/229 (45.85%), Postives = 152/229 (66.38%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRV 688 EA+VDLA L G PA V+CE+++DDG+MA+ L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ Sbjct: 144 EAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKFKEKHKLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERI 368
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAC (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain COL) GN=ribBA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.231e-50 Identity = 105/229 (45.85%), Postives = 152/229 (66.38%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRV 688 EA+VDLA L G PA V+CE+++DDG+MA+ L++F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ Sbjct: 144 EAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERI 368
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAN (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain N315) GN=ribBA PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.206e-49 Identity = 105/229 (45.85%), Postives = 151/229 (65.94%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRV 688 EA+VDLA L G PA V+CE+++DDG+MA+ L+ F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ Sbjct: 144 EAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQNFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERI 368
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAM (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ribBA PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.206e-49 Identity = 105/229 (45.85%), Postives = 151/229 (65.94%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRV 688 EA+VDLA L G PA V+CE+++DDG+MA+ L+ F ++ LK+I+I DLI YR+K + ++ + ++PT +G F Y +++ E + + KG I ++ VR+HS CLTGDIF S RCDCG QL +M+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L+ + + L++NNPSK+ GLK YG+ +A R+ Sbjct: 144 EAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQNFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHEN--VRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHG-GMIIYLP-QEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERI 368
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_BURMA (GTP cyclohydrolase-2 OS=Burkholderia mallei GN=ribA PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.983e-49 Identity = 93/166 (56.02%), Postives = 123/166 (74.10%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 + A +PT +G FT+Y +R EH+A+V GD+ + +L R+HSECLTGD+FGS RCDCG+QL L+++ I A GRGVL+YLRGHEGRGIGL +K+RAY LQ+ GRDTVEAN +LGLP D+REY A +LR L V +++LM+NNP K+ L +G+ V RV L Sbjct: 5 ATATLPTRYGTFTSYAFRVAGGDAEHLALVMGDVAEQPSVLTRLHSECLTGDVFGSYRCDCGEQLDLSLRYIAAEGRGVLLYLRGHEGRGIGLSNKIRAYALQEQGRDTVEANLDLGLPDDAREYDSAAAILRILKVTSVRLMSNNPKKFDTLARHGIPVCERVAL 170
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAES (Riboflavin biosynthesis protein ribBA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ribBA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.640e-48 Identity = 101/231 (43.72%), Postives = 151/231 (65.37%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA L G PA V+CE+++DDG+MA+ L+ F +R +LK+I+I L+ +R+ + V+ + ++PT +G F Y + + E +A+VKGD+ + VR+HS CLTGDIF S RCDCG QL +M+ I+ G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y + A++L+ + + L++NNP K+ GL+ YG+ + R+ L Sbjct: 144 EAAVDLARLTGAQPAGVICEIMNDDGTMAKGEDLQSFKERHHLKMITIKSLVAFRKAVELNVNLKAKVKMPTDFGHFDMYGFTTDYSDEEIVAIVKGDLKSNPN--VRMHSACLTGDIFHSQRCDCGAQLEASMKYIDEHG-GMIIYL-PQEGRGIGLINKLRAYELIEKGYDTVTANLALGFDEDLRDYHVAAEILKYFDISEINLLSNNPKKFEGLEDYGIEIVDRIEL 370
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAEQ (Riboflavin biosynthesis protein ribBA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ribBA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.640e-48 Identity = 101/231 (43.72%), Postives = 151/231 (65.37%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA L G PA V+CE+++DDG+MA+ L+ F +R +LK+I+I L+ +R+ + V+ + ++PT +G F Y + + E +A+VKGD+ + VR+HS CLTGDIF S RCDCG QL +M+ I+ G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y + A++L+ + + L++NNP K+ GL+ YG+ + R+ L Sbjct: 144 EAAVDLARLTGAQPAGVICEIMNDDGTMAKGEDLQSFKERHHLKMITIKSLVAFRKAVELNVNLKAKVKMPTDFGHFDMYGFTTNYSDEEIVAIVKGDLKSNPN--VRMHSACLTGDIFHSQRCDCGAQLEASMKYIDEHG-GMIIYL-PQEGRGIGLINKLRAYELIEKGYDTVTANLALGFDEDLRDYHVAAEILKYFDISEINLLSNNPKKFEGLEDYGIEIVDRIEL 370
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAS1 (Riboflavin biosynthesis protein ribBA OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=ribBA PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.128e-47 Identity = 103/231 (44.59%), Postives = 148/231 (64.07%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EASVDLA L G PAA++CE++D+DG+MA+ L F + L +ISI DL +YR+ +D + ++PT +G F Y + + + + + GDI ++ VR+HS CLTGDIF S RCDCG+QLA +M+ I G G+++YL EGRGIGL +KL+AY L + G DTV AN LG D R+Y AQ+L+ GV ++ L++NNP K+ L+ YG+ +A R+ L Sbjct: 144 EASVDLAKLTGAKPAALICEIMDEDGTMAKGASLEAFKETHGLVMISIEDLEKYRKSSISKLDAKAKVKMPTEYGNFDMYGFTTDNSEEDIVVIANGDINKTEN--VRIHSACLTGDIFHSQRCDCGEQLAASMKYIAEHG-GMILYLP-QEGRGIGLINKLKAYELIEQGYDTVSANIALGFEEDLRDYQNAAQILKYFGVDSVNLLSNNPKKFESLESYGIHIAKRIEL 370 The following BLAST results are available for this feature:
BLAST of CX292148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 285
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292148 ID=CX292148; Name=CX292148; organism=Citrus clementina; type=EST; length=702bpback to top |