CX292148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_STAHJ (Riboflavin biosynthesis protein ribBA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ribBA PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47 Identity = 104/231 (45.02%), Postives = 145/231 (62.77%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 EA+VDLA L PA V+CE++++DG+MA+ +L F + LK+I+I L+ Y++ +D V+ + +PT G F Y + S L E + + KG+ ++ VR+HS CLTGDIF S RCDCG QL AM+ I G G+++YL EGRGIGL +KLRAY L + G DTV AN LG D R+Y I AQ+L V+ + L++NNP K+ GL YG+ VA R P+ Sbjct: 144 EAAVDLAKLTKAAPAGVICEIMNEDGTMAKGEQLEAFKHQHGLKMITIESLVNYQKDKDTSVELKAKVNMPTDHGAFEMYGFESSLTKEEIVVLAKGEPRVTEN--VRIHSACLTGDIFHSQRCDCGAQLESAMKYINEHG-GMIIYLP-QEGRGIGLINKLRAYELIEQGHDTVTANLALGFDEDLRDYHIAAQILNYFNVQQVNLLSNNPKKFEGLSEYGIKVADRTPI 370
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_STRCO (GTP cyclohydrolase-2 OS=Streptomyces coelicolor GN=ribA PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47 Identity = 95/170 (55.88%), Postives = 125/170 (73.53%), Query Frame = 2 Query: 185 VDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 V+R +PT++G F A+ Y G E +A+V GD+G +D+L R+HSECLTGD FGS C+CG QLA A++Q+ AG G++VYLRGHEGRGIGL KLRA LQ +G DTVEAN LGLPVD+R+YG+ A++L DLGVR+++LM+NNP K L +G+ VA +VPL Sbjct: 18 VERIVVTPLPTVYGKFRAFGYFDHERGDEQVALVHGDLG-AEDVLTRLHSECLTGDAFGSQHCECGAQLASALRQVADAGSGIVVYLRGHEGRGIGLLAKLRAMALQAEGLDTVEANLALGLPVDARDYGVAARILDDLGVRSVRLMSNNPRKREALVRHGIRVAEQVPL 186
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBBA_THEMA (Riboflavin biosynthesis protein ribBA OS=Thermotoga maritima GN=ribBA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.741e-46 Identity = 99/225 (44.00%), Postives = 146/225 (64.89%), Query Frame = 2 Query: 2 EASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAV 676 EAS++++ LAGF AV+ E++D+ G+ L + + +++ +L ++ + D+ R KR L+ + + A +PT +G F + + LDG EH A+VK + D + VR+HSEC+TGD+ S RCDCG QLA ++ + A G G+L+YLR EGRGIGL +K+ AY+LQD G DTVEAN LG D R+Y AQ+L+ LG+ + L TNN K VGL+ YG+ V Sbjct: 130 EASLEISELAGFSRHAVIVEILDEKGNSHNLDYVLKLSEKFSLPVLEMDDVWREFVKRKLLMKKKAEATLPTDFGVFKVVSFENHLDGKEHFAIVKEPLED--PVAVRIHSECVTGDVLSSLRCDCGSQLANFLRYMSAHG-GILIYLR-QEGRGIGLSNKIAAYSLQDKGLDTVEANRVLGFSEDERDYAPAAQILKALGIERVLLFTNNQRKTVGLEKYGIEV 350
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_NEIMA (GTP cyclohydrolase-2 OS=Neisseria meningitidis serogroup A GN=ribA PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.941e-45 Identity = 88/172 (51.16%), Postives = 120/172 (69.77%), Query Frame = 2 Query: 179 KLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +L++ ++ R+PT WG FT + + G EH+A+ GD DG +L R+HSECLTGD S +CDCG QL AM+ ++A GRG++VYLR EGRGIGL +K+RAY+LQD G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL Sbjct: 3 ELLNYVASCRLPTEWGVFTMHGFEEA-GGQEHVALTVGDCSDGNPVLTRIHSECLTGDALFSKKCDCGPQLEAAMKAVQAEGRGIIVYLR-QEGRGIGLINKIRAYHLQDQGMDTVEANVALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPL 172
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_NEIG1 (GTP cyclohydrolase-2 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=ribA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44 Identity = 87/172 (50.58%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 179 KLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +L+D ++ R+PT WG FT + + +G EH+A+ G+ DG +L R+HSECLTGD S +CDCG QL AM+ ++A GRG++VYLR EGRGIGL +K+RAY+LQ+ G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL Sbjct: 3 ELLDHVASCRLPTEWGVFTMHGFEEA-NGQEHVALTVGNCSDGNPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQAEGRGIIVYLR-QEGRGIGLINKIRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPL 172
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_NEIMF (GTP cyclohydrolase-2 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=ribA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.795e-44 Identity = 85/172 (49.42%), Postives = 120/172 (69.77%), Query Frame = 2 Query: 179 KLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 ++++ ++ R+PT WG FT + + +G EH+A+ G+ DG +L R+HSECLTGD S +CDCG QL AM+ ++ GRG++VYLR EGRGIGL +K+RAY+LQD G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL Sbjct: 3 EMLNHVASCRLPTEWGVFTMHGFEEA-NGQEHVALTVGNFSDGNPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLR-QEGRGIGLINKIRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPL 172
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_NEIMB (GTP cyclohydrolase-2 OS=Neisseria meningitidis serogroup B GN=ribA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.795e-44 Identity = 85/172 (49.42%), Postives = 120/172 (69.77%), Query Frame = 2 Query: 179 KLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 ++++ ++ R+PT WG FT + + +G EH+A+ G+ DG +L R+HSECLTGD S +CDCG QL AM+ ++ GRG++VYLR EGRGIGL +K+RAY+LQD G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL Sbjct: 3 EMLNHVASCRLPTEWGVFTMHGFEEA-NGQEHVALTVGNFSDGNPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLR-QEGRGIGLINKIRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPL 172
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_NEIM0 (GTP cyclohydrolase-2 OS=Neisseria meningitidis serogroup C (strain 053442) GN=ribA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.795e-44 Identity = 85/172 (49.42%), Postives = 120/172 (69.77%), Query Frame = 2 Query: 179 KLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 ++++ ++ R+PT WG FT + + +G EH+A+ G+ DG +L R+HSECLTGD S +CDCG QL AM+ ++ GRG++VYLR EGRGIGL +K+RAY+LQD G DTVEAN LGLPVD+R++ + + LG+R++KL+TNNP K LK G+ V R+PL Sbjct: 3 EMLNHVASCRLPTEWGVFTMHGFEEA-NGQEHVALTVGNFSDGNPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLR-QEGRGIGLINKIRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKDAGINVVERIPL 172
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_AZOVD (GTP cyclohydrolase-2 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ribA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44 Identity = 91/166 (54.82%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT +G FT + + G EH+A+ G + DG +L R+HSECLTGD S RCDCG QL A++ I A GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+YGI ML LG+ +KLMTNNP K L+G G+ V RVPL Sbjct: 7 AASKLPTPFGVFTMHGFLDEATGKEHVALTLGTVDDGAPVLGRLHSECLTGDALFSLRCDCGFQLEAALRAIAAEGRGVLLYLR-QEGRGIGLLNKIRAYKLQDAGADTVEANERLGFRADQRDYGICKPMLEHLGITAIKLMTNNPRKVKALEGAGIQVTERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPK (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain KT2440) GN=ribA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.876e-43 Identity = 90/166 (54.22%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT + FT + + G EH+ + GDI DGQ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV++++LMTNNP K L + VA RVPL Sbjct: 7 AASKLPTPFATFTMHGFLDEATGREHVVLSLGDIADGQPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPL 171 The following BLAST results are available for this feature:
BLAST of CX292148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 285
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292148 ID=CX292148; Name=CX292148; organism=Citrus clementina; type=EST; length=702bpback to top |