CX292148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEP1 (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ribA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.876e-43 Identity = 90/166 (54.22%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT + FT + + G EH+ + GDI DGQ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV++++LMTNNP K L + VA RVPL Sbjct: 7 AASKLPTPFATFTMHGFLDEATGREHVVLSLGDIADGQPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_AERHH (GTP cyclohydrolase-2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ribA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.756e-43 Identity = 88/164 (53.66%), Postives = 114/164 (69.51%), Query Frame = 2 Query: 203 ARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +++PT WG FT ++ G +H A+V GDI + +L R+HSECLTGD S RCDCG QL A++ I AGRGVL+Y+R EGRGIGL +K+RAY+LQD G DTVEAN LG D R+Y I A ML+ L V+++KLMTNNP K ++ +G+ VA RVPL Sbjct: 10 SKLPTPWGTFTLVGFQETGTGKDHAALVMGDITGDEPVLGRIHSECLTGDALFSLRCDCGFQLQAALENIAKAGRGVLLYVR-QEGRGIGLLNKIRAYHLQDQGADTVEANVALGFAADMRDYTICADMLKQLEVKSLKLMTNNPRKMKAMESFGIPVAERVPL 172
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPG (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain GB-1) GN=ribA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.407e-43 Identity = 89/166 (53.61%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT + FT + + G EH+ + GDI DGQ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL Sbjct: 7 AASKLPTPFATFTMHGFLDEATGREHVVLSLGDIADGQPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMNIVVAERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSESM (GTP cyclohydrolase-2 OS=Pseudomonas syringae pv. tomato GN=ribA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.368e-43 Identity = 89/166 (53.61%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT + F + + G EH+ + GD+ DG +L RVHSECLTGD S RCDCG QL AM+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML+ LGV++++LMTNNP K L G+ VA RVPL Sbjct: 7 AASKLPTPFAEFAMHGFIESATGREHVVLSLGDVADGAPVLGRVHSECLTGDALFSQRCDCGSQLEAAMRAIATEGRGVLLYLR-QEGRGIGLMNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLQHLGVQSLRLMTNNPRKVKALTDMGINVAERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEPW (GTP cyclohydrolase-2 OS=Pseudomonas putida (strain W619) GN=ribA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.368e-43 Identity = 89/166 (53.61%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT + FT + + G EH+ + GDI DG+ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV++++LMTNNP K L + VA RVPL Sbjct: 7 AASKLPTPFATFTMHGFLDEATGREHVVLSLGDIADGEPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTDMNIKVAERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEFS (GTP cyclohydrolase-2 OS=Pseudomonas fluorescens (strain SBW25) GN=ribA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.093e-42 Identity = 91/166 (54.82%), Postives = 109/166 (65.66%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT + FT + G EH+ + GDI DG +L RVHSECLTGD S RCDCG QL AM+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y I ML LGV +++LMTNNP K L G+ VA RVPL Sbjct: 7 AASKLPTPFATFTMNGFLEEATGREHVVLSLGDIADGAPVLGRVHSECLTGDALFSQRCDCGSQLEAAMRAIAREGRGVLLYLR-QEGRGIGLMNKIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVSSLRLMTNNPRKVKALTEMGITVAERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_HAHCH (GTP cyclohydrolase-2 OS=Hahella chejuensis (strain KCTC 2396) GN=ribA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.864e-42 Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 ++ ++PT +G F + ++ + EHIA+ GDIGDG +L R HSECLTGD S RCDCG QL A++ I A GRG+L+YLR EGRGIGL +K+RAYNLQD G DTVEANE+LG D R+Y + ML LG+ ++LMTNNP K L G+ V RVPL Sbjct: 7 ASCKLPTPFGVFDMHGFQEVGTQKEHIALTLGDIGDGASVLARTHSECLTGDALFSMRCDCGYQLDEALRSIAAEGRGILLYLR-QEGRGIGLLNKIRAYNLQDQGADTVEANEQLGFAADMRDYSMCKPMLYHLGISRIRLMTNNPRKVDSLTKLGIEVVERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEE4 (GTP cyclohydrolase-2 OS=Pseudomonas entomophila (strain L48) GN=ribA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.180e-42 Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT + FT + + G EH+ + GDI DG+ +L R+HSECLTGD S RCDCG QL A+Q I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEANE LG D R+Y + ML LGV++++LMTNNP K L + VA RVPL Sbjct: 7 AASKLPTPFAIFTMHGFLDEATGREHVVLSLGDIADGEPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAREGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANERLGFAADQRDYAMCLPMLEHLGVKSLRLMTNNPRKVKALTDMSIKVAERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEA7 (GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa (strain PA7) GN=ribA PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42 Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT +G FT + + G EH+A+ GDI DG +L R+HSECLTGD S RCDCG QL A+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEAN +LG D R+Y + ML LGV +++LMTNNP K L+ Y + VA RVPL Sbjct: 7 AASKLPTPFGEFTMHGFLDEESGKEHVALTMGDIADGAPVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAEEGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALESYAVTVAERVPL 171
BLAST of CX292148 vs. ExPASy Swiss-Prot
Match: RIBA_PSEAE (GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa GN=ribA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.424e-42 Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 197 SAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPL 694 +A+++PT +G FT + + G EH+A+ GDI DG +L R+HSECLTGD S RCDCG QL A+ I GRGVL+YLR EGRGIGL +K+RAY LQD G DTVEAN +LG D R+Y + ML LGV +++LMTNNP K L+ Y + VA RVPL Sbjct: 7 AASKLPTPFGEFTMHGFLDEESGKEHVALSMGDIADGAPVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAEEGRGVLLYLR-QEGRGIGLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALESYAITVAERVPL 171 The following BLAST results are available for this feature:
BLAST of CX292148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 285
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292148 ID=CX292148; Name=CX292148; organism=Citrus clementina; type=EST; length=702bpback to top |