CX292158

Overview
NameCX292158
Unique NameCX292158
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15
Identity = 58/198 (29.29%), Postives = 94/198 (47.47%), Query Frame = 2
Query:  152 QIPVIDMQSLLSKESMDSELA-KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDIEGFGQAFVVSEEQKL------DWADLFNMMTLPVHLRKPHLFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEEMREFFENGVQXMRMNYYPPCPQPEKVMGLSPHSDAAALAILRQ 724
            +IPVI++  L S   +  E+  K+  A +++GFFQ+VNHG+    ++K+   V  F     + K++Y+      + F + F+ S    L      +W D    + +  +   P  FP++    R+ L  YS  ++ L   L   + E L +K   + E        +  +YYP CPQPE   G S HSD+  L IL Q
Sbjct:   90 KIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSR----DRFNKNFLYSSNYVLIPGIACNWRDTMECI-MNSNQPDPQEFPDV---CRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ 279          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 53/201 (26.37%), Postives = 95/201 (47.26%), Query Frame = 2
Query:  155 IPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDIEGFGQAFVVSEEQKLDWAD--LFNMMTLPVHLRKPHLFPELPSSLRE---TLEVYSMELKTLSENLISKMGEVLNIKDEEM------REFFENGVQXMRMNYYPPCPQPEKVMGLSPHSDAAALAILRQ 724
            +PV+DM+   + E++         A ++WG F L  HG+    L +++  + G F L   EK +  + PGD  G+G   + S   K  W++   F+   L   LRK  L+P+     R     +E +  E++ L++ L+      L +  E++      ++  E     M +N+YP CP P++ +GL  H+D+     + Q
Sbjct:   49 VPVVDMRDPCAAEAVA-------LAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ 240          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 62/226 (27.43%), Postives = 105/226 (46.46%), Query Frame = 2
Query:   53 VQELVKNPALVVPDRYIRP-DQDSPLISDDTLISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDIEG---FGQAFVVSEEQKLDWADLFNMMTLPVHLRKPHLFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEEMREFFENGVQXMRMNYYPPCPQPEKVMGLSPHSDAAALAIL 718
            V  L    A  +PD ++ P D+  P  +D +L    P+IDM    S+   +   A LD   KE+GF Q+VNHG+S   L ++      FF++  E+K +++            G AF    E+   W D+  ++  P+       +P  P  LRE +  Y+   + ++  ++  + E L ++ +        G   + +NYYPP P P + +GL PH D   + +L
Sbjct:    4 VMNLTPVHASSIPDSFLLPADRLHPATTDVSL----PIIDM----SRGRDEVRQAILDSG-KEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKY--WIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVL 217          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 53/201 (26.37%), Postives = 93/201 (46.27%), Query Frame = 2
Query:  155 IPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDIEGFGQAFVVSEEQKLDWAD--LFNMMTLPVHLRKPHLFPELPSSLRE---TLEVYSMELKTLSENLISKMGEVLNIKDEEM------REFFENGVQXMRMNYYPPCPQPEKVMGLSPHSDAAALAILRQ 724
            +PV+DM+   + E++         A ++WG F L  HG+    L  ++  + G F L   EK +  + PGD  G+G   + S   K  W++   F+   L   LRK  L+P+     R     +E +  E++ L++ L+      L +  E++       +  E     M +N+YP CP P++ +GL  H+D+     + Q
Sbjct:   49 VPVVDMRDPCAAEAVA-------LAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ 240          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 48/196 (24.49%), Postives = 98/196 (50.00%), Query Frame = 2
Query:  146 ISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDIEGFGQAFVVSEEQKLDWADLFNMMTLPVHLRKPHLFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEEMREFF---ENGVQXMRMNYYPPCPQPEKVMGLSPHSDAAALAILRQ 724
            +   PVI+M+ +  +E   + +  ++ AC+ WGFF+LVNHG+    ++ +++  +  +   ME++ K       +EG     + +E   +DW   + +  LP         P+L    R  ++ ++  L+ L+E L+  + E L ++   +++ F   +      ++  YPPCP+ + + GL  H+DA  + +L Q
Sbjct:    1 MESFPVINMEKMNGEERA-ATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEG-----IQAEVTDMDWESTYFLRHLP--QSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQ 188          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.601e-13
Identity = 56/216 (25.93%), Postives = 98/216 (45.37%), Query Frame = 2
Query:  101 IRPDQDSPLISDDTLISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDIEGFGQAFVVSEEQKLDWADLFNMMTLP--VHLRKPHLFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEEMREFF---ENGVQXMRMNYYPPCPQPE----KVMGLSPHSDAAALAILR 721
            ++P + +PL +       IPV+D+    +K  + +       AC+++GFF+LVNHG+    +  L+ E   FF  S  EK +    P D  G+G    +     + W +   + T P  +  +   +F E P   R  +E Y   +K +   ++  M E L I+           E      R+N+YPPCP+ +     ++G   H+D   +++LR
Sbjct:   15 LKPFKSTPLFTG------IPVVDLTHPDAKNLIVN-------ACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDR--AGPPDPFGYGSK-RIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLR 214          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13
Identity = 52/195 (26.67%), Postives = 97/195 (49.74%), Query Frame = 2
Query:  152 QIPVIDMQSLLSKESMDSE--LAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFN--LSMEEKKKYWQHPGDIEGFGQAFVVSEEQKLDWADLFNMMTLPVHLRKPHLFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEEMREFFENGVQXMRMNYYPPCPQPEKVMGLSPHSDAAALAILRQ 724
            ++PVID+  L S E +  +  + ++  A KEWGFFQ+VNHG+     E +  E +  F+   S++ ++++     +   +G     S  Q    ++ F+++     L +     +  ++LR  +E Y  E+  +++ +   +G+ +N+  E     FE     +R+N Y P     +V GL PH+D + L IL Q
Sbjct:   39 KLPVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQ-YSVSEAFHII-----LSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQ 227          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 49/195 (25.13%), Postives = 90/195 (46.15%), Query Frame = 2
Query:  146 ISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW---QHPGDIEGFGQAFVVSEEQKLDWADLFNMMT-LPVHLRKPHLFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEEMREFFENGVQXMRMNYYPPCPQPEKVMGLSPHSDAAALAIL 718
            +  +P+ID+         D     +  A KE GFFQ+VNHG+S   +  ++   E FF+L   +K   +   +H  +    G  +    E+   W D   +    PV     + +P+ P  LR+ +E ++ + + + + L+  + E + I+ +        G   + +N+YP CP P+K +G  PH D   + +L
Sbjct:   32 VVSLPIIDLSC-----GRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKY--WRDCLRLACPFPVD-DSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLL 218          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 51/193 (26.42%), Postives = 92/193 (47.67%), Query Frame = 2
Query:  179 LLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGD--IEGFGQAFVVSEEQ----KLDWADLFNMMTLPVHLRKPHLFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEEMREFFENGVQXM-----RMNYYPPCPQPEKVMGLSPHSDAAALAILRQ 724
            LL        +A L  AC+ WGFF+L+NHG+S    E+ +        ++ E  +++++   +   + F    + S E      LDW   F +  LP         P+L      T++ +++ L+ L+E L+  + E L ++   ++  F  G   +     +++ YPPCP+PE + GL  H+DA  + +L Q
Sbjct:    3 LLEGSRRSDAMAVLRDACENWGFFELLNHGISHEPNEQSE-------TVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTS--NISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQ 186          
BLAST of CX292158 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 53/201 (26.37%), Postives = 96/201 (47.76%), Query Frame = 2
Query:  155 IPVIDMQSLLSKESMDSEL-AKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDIEGFGQAFVVSEEQKLDWADLFNMMTLPVHLRKPH---LFPELPSSLRETLEVYSMELKTLSENLISKMGEVLNIKDEE-----MREFFENGVQXMRMNYYPPCPQPEKVM---GLSPHSDAAALAILR 721
            +PV+   S+      D E   ++  AC+E+GFF++VNHG+    + +L++E  GFF L    K +    P +  G+G    +     + W +   +   P  L  P    +F + P   RE++E Y  E+K +S  ++  + E L I+  +     +R+  E     +R+N+YP   +  + M   G   H+D   +++LR
Sbjct:   23 VPVLTSHSIPVVNLADPEAKTRIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNR--AGPPEPYGYGNK-RIGPNGDVGWIEYLLLNANP-QLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRD--EKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLR 217          
The following BLAST results are available for this feature:
BLAST of CX292158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
DV4H_CATRO3.630e-1529.29Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
G3O22_WHEAT4.741e-1526.37Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
IDS2_HORVU8.087e-1527.43Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G3O21_WHEAT2.353e-1426.37Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
ACCO_DIOKA2.353e-1424.491-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
G2OX_PHACN2.601e-1325.93Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX7_ARATH3.397e-1326.67Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
IDS3_HORVU7.569e-1325.132'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCO_DENCR2.202e-1226.421-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
G2OX2_ARATH3.756e-1226.37Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC04011B12SK FlavFr1 Citrus clementina cDNA clone C04011B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292158 ID=CX292158; Name=CX292158; organism=Citrus clementina; type=EST; length=740bp
ATTTGAGGAACAAAAGATGGCCCAGATTGCAAGATCTCTCCTTGTGCCTT
GTGTTCAAGAGTTGGTCAAGAATCCTGCGTTAGTTGTCCCCGACAGATAC
ATACGTCCAGATCAAGATTCACCCCTCATTTCTGATGATACTTTGATTTC
ACAGATACCAGTTATTGACATGCAAAGCTTACTTTCTAAAGAATCAATGG
ATTCTGAGCTAGCCAAGCTCGACTTCGCATGCAAAGAATGGGGTTTTTTC
CAGCTGGTAAATCATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAA
AGAGGTTGAGGGATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATT
GGCAGCATCCAGGAGATATAGAAGGATTTGGACAAGCCTTTGTTGTATCC
GAGGAACAAAAGCTTGATTGGGCTGACCTTTTCAACATGATGACTCTTCC
AGTTCATCTGAGGAAGCCACACTTATTTCCTGAGCTCCCTTCTTCCCTCA
GAGAGACCTTGGAAGTTTACTCAATGGAATTAAAAACCCTTTCCGAGAAC
CTAATATCGAAAATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAG
AGAATTCTTTGAAAATGGAGTGCAAGNCATGAGGATGAATTATTACCCTC
CATGTCCTCAGCCCGAGAAGGTTATGGGCCTGTCGCCTCATTCTGATGCA
GCTGCACTTGCCATTCTGCGACAACTAATGAAGTGGAGGG
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