CX292203

Overview
NameCX292203
Unique NameCX292203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.207e-30
Identity = 82/213 (38.50%), Postives = 104/213 (48.83%), Query Frame = 3
Query:   84 KFDITNNCPDTVWAAAVPGG--------GRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 647
            K   TN C  TVW   + G         G +L  G + ++ A P   + R + RT+C  DASGK  C T DC +G + C G GAAP  TL E  +      DF D+S +DGFN+PM   SV+P       +   C A+I   CP  L+V G       C   C  F   +YCC   N     C P  +SK FK +CP  YSY  DD +STFTC
Sbjct:   26 KITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDA-PSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPM---SVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTC 234          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.207e-30
Identity = 77/210 (36.67%), Postives = 105/210 (50.00%), Query Frame = 3
Query:   84 KFDITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 647
            K   TNNCP T+W   +        P  G  L    + T+  +   K  R WART+C  + SGK  CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+N+P+  ++   + + +   C AN+   CP EL+V G       C   C  F   +YCC         C  T +S+ FK +CP  YSY  DD+TSTFTC
Sbjct:   24 KITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKG-RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTC 231          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.495e-30
Identity = 83/209 (39.71%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   99 NNCPDTVWAAAVPGGGRQLDK------GQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCN-GLLECQGY-GAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCN-----SGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG 656
            NNCP TVW A+   G  QL         Q       P   + R WART+C  DASGK  CET DC+ G L C G  G  P TLAE+ +      DF D+S +DGFN+PM   SV+P       ++  C AN+   CP+EL+  G       C   C  F   +YCC         C PT +S+ F ++CPD YSY  DD    FTC  G
Sbjct:   30 NNCPYTVWPASF--GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGG 233          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30
Identity = 84/214 (39.25%), Postives = 103/214 (48.13%), Query Frame = 3
Query:   99 NNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAA-----------RIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG 656
            NNCP  VW    PG      K Q  T   E  ++A+           R WART C  DASGK  C T DC +G + C G GA P  TLAE+ +      DF D+S +DGFN+PM   SV+P       +   C AN+   CP+EL+  G       C   C  F T +YCC         C PT +S+ F + CPD YSY  DD   TFTC  G
Sbjct:   30 NNCPYMVW----PGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGG 236          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.036e-28
Identity = 76/205 (37.07%), Postives = 96/205 (46.83%), Query Frame = 3
Query:   99 NNCPDTVWAAAVPGGGRQLDKGQTWTITAE-------PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSV--SPSCNRVIKCTANILGECPNELKVPG-------GCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 647
            N C   VW    P  G+ L  G  + + A        P   + R W R  C FD SG+G C TGDC G L C G G   P TLAE  L    ++DF D+S +DG+N+ M    V  S  C+    C +++   CP  L+V          C   C  F + +YCC     N  +C PT +SK FK  CP  YSY  DD TS  TC
Sbjct:   27 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP--ELDFYDVSLVDGYNLAMSIMPVKGSGQCS-YAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC 228          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28
Identity = 78/213 (36.62%), Postives = 105/213 (49.30%), Query Frame = 3
Query:   93 ITNNCPDTVWAAAVPGGGRQ-LDKG----QTWTITAEPGTKA---ARIWARTKCQFDASGKGKCETGDCNGLLECQGY-GAAPNTLAEYALKQFN-DMDFIDMSNIDGFNVPM-----EFSSVSPSCNRVIKCTANILGECPNELKVPG--------GCNGPCPVFKTDEYCCNS-----GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 647
            + NNCP T+W A  P  G   L++G     + T  + P   A    RIWART C +   GK  C TGDC G +EC G  GAAP TLA++ L   + D     +S +DGFN+P+     E   V P    V+ C AN+L  CP  L+           GC   C  FK+DE+CC +       C P+ +S+FFK  CP  ++Y  D  +    C
Sbjct:   33 LVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPHEGKGVCP----VVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHEC 240          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.496e-27
Identity = 72/188 (38.30%), Postives = 86/188 (45.74%), Query Frame = 3
Query:   87 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 647
            F ITN C  TVW AA P GGG QL  GQTWTI    GT + R+W RT C FD SG+G C TGDC G L C   G  P TLAE+ +      DF D+S IDG+NV M FS           C++ +   C +                                      RCPD Y +P+D+ T T  C
Sbjct:   29 FTITNRCSFTVWPAATPVGGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHAC 165          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.954e-27
Identity = 74/207 (35.75%), Postives = 101/207 (48.79%), Query Frame = 3
Query:  111 DTVWAAAVPGGGR--------QLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG 656
            +TVW   + G  +        +L    + ++ A P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP +L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDA-PSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGG 203          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.954e-27
Identity = 74/207 (35.75%), Postives = 97/207 (46.86%), Query Frame = 3
Query:   93 ITNNCPDTVWAAAV--------PGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQG-YGAAPNTLAEYAL-KQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKV------PGGCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 647
            + NNC ++VW   +          GG  L  G+   +    G  + R+W R  C FD+ G+G C TGDC G+L C G  GA P T+ E  L    + M F D+S +DGFN P+  ++V          C A++   CP+ L+V        GC   C     D YCC     +   C PT FS  FK  CP  YSY  DDATS   C
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGW-SGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC 238          
BLAST of CX292203 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.814e-26
Identity = 52/83 (62.65%), Postives = 59/83 (71.08%), Query Frame = 3
Query:   84 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 332
            KFDI N C  TVWAA +PGGG++LD+GQTWT+    GT +AR W RT C FDASGKG C+TGDC   L C   GA P TLAEY
Sbjct:   21 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103          
The following BLAST results are available for this feature:
BLAST of CX292203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP1_PRUPE4.207e-3038.50Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA4.207e-3036.67Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP2_PRUPE5.495e-3039.71Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP_PRUAV7.176e-3039.25Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLPH_ARATH1.036e-2837.07Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
OLP1_SOLLC1.768e-2836.62Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLP_ORYSJ1.496e-2738.30Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TP1B_MALDO1.954e-2735.75Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLPH_ORYSJ1.954e-2735.75Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PRR3_JUNVI4.814e-2662.65Pathogenesis-related protein (Fragment) OS=Juniper... [more]

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Properties
Property NameValue
Genbank descriptionC04011F12SK FlavFr1 Citrus clementina cDNA clone C04011F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292203 ID=CX292203; Name=CX292203; organism=Citrus clementina; type=EST; length=660bp
CTCTCCAAATGAAGTTCGTTAAAGCTCTTCCCATTTCTTCTGCTCTTCTT
ATTATCATTTCCATCACCCTGACTCATGCTGCCAAATTCGATATCACAAA
CAATTGCCCCGACACCGTCTGGGCCGCCGCTGTGCCCGGAGGCGGCAGGC
AACTCGACAAGGGTCAAACATGGACCATCACCGCCGAGCCAGGCACAAAA
GCAGCCCGCATTTGGGCTCGAACCAAATGCCAGTTTGATGCTTCCGGCAA
AGGCAAATGCGAGACCGGTGACTGTAACGGACTCCTCGAGTGCCAAGGCT
ACGGTGCAGCACCTAACACCTTGGCCGAGTACGCGTTGAAGCAATTCAAT
GACATGGATTTCATTGACATGTCCAACATTGACGGATTCAATGTTCCCAT
GGAATTTAGCTCTGTCTCTCCCTCATGCAACCGCGTGATCAAGTGCACTG
CTAACATTCTTGGCGAGTGCCCGAATGAATTGAAGGTTCCTGGAGGATGT
AACGGGCCGTGCCCCGTGTTCAAGACCGACGAGTACTGTTGCAATTCAGG
CAACTGCGGACCTACAGGTTTCTCCAAGTTTTTCAAGGATAGGTGCCCGG
ATGTTTACAGTTACCCTAAGGATGACGCTACCAGCACATTTACTTGCCCG
ACTGGGACAG
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