CX292227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROMS (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus (strain AS9601) GN=mnmG PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28 Identity = 77/225 (34.22%), Postives = 115/225 (51.11%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQ 690 EPYR+LTS RSE+RL LR DNAD RLTPLG ++GLI+++RW YQ+K+ + EEK RL R+ K+T+E ++ + +G +K S+TL+ LLK+P+ Y L K+ L + ++ VEIDIKYEG++ R + LP +++Y + TLSLE+RE L+K++P+ Sbjct: 441 EPYRVLTS----------------------RSEYRLTLRGDNADRRLTPLGYQIGLINEKRWSAYQEKMNLLEEEKFRLNNTRL--------------------------KNTDE-----ISKKIELETGSKIKGSTTLKELLKRPNFHYSDLIKYNLNERNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIETLSLEARENLNKIKPK 612
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_SYNR3 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Synechococcus sp. (strain RCC307) GN=mnmG PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 78/224 (34.82%), Postives = 110/224 (49.11%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYR+LTS RSE+RL+LR DNAD RLTPL RELGLID RRW++Y+ K ++ E +RL+TVR+ +D V P V +G +K S TL LL++P L +HG +G L ++ EID+KY G++ R R +P +D+Y++TTLS E+RE+L+ +P Sbjct: 434 EPYRVLTS----------------------RSEYRLVLRGDNADRRLTPLARELGLIDARRWQIYERKQEGIAAETKRLETVRLK-----------VSDPVAPA--------------------VVEQTGAAIKGSITLADLLRRPGFHSNDLVRHGLADGELPVDVREGAEIDVKYSGYLARQTQQIERVQRQGQRLIPSGIDFYSITTLSREARERLTAAQP 604
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROM2 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus (strain MIT 9215) GN=mnmG PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 77/225 (34.22%), Postives = 115/225 (51.11%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQ 690 EPYR+LTS RSE+RL LR DNAD RLTPLG ++GLID++RW Y++K+ + EEK RL R+ K+T+E ++ + +G +K S+TL+ LLK+P+ Y L K+ L + ++ VEIDIKYEG++ R + LP +++Y + TLSLE+RE L+K++P+ Sbjct: 441 EPYRVLTS----------------------RSEYRLTLRGDNADRRLTPLGYQIGLIDEKRWSAYEEKMKLLEEEKLRLNNTRL--------------------------KNTDE-----ISKKIELDTGSKIKGSTTLKELLKRPNFHYLDLIKYNLAKKNLGYSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIDTLSLEARENLNKIKPK 612
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROM0 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus (strain MIT 9301) GN=mnmG PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26 Identity = 77/225 (34.22%), Postives = 112/225 (49.78%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQ 690 EPYR+LTS RSE+RL LR DNAD RLT LG ++GLI+++RW YQ+K+ + EEK RL R+ K+TEE ++ + +G +K S TL+ LLK+P Y L K+ L + ++ VEIDIKYEG++ R + LP +++Y + TLSLE+RE L+K++P+ Sbjct: 441 EPYRVLTS----------------------RSEYRLTLRGDNADRRLTQLGYQIGLINEKRWSAYQEKMKLLEEEKFRLNKTRL--------------------------KNTEE-----ISKKIELETGSKIKGSITLKELLKRPDFHYSDLIKYNLTEKNLGSSIQEGVEIDIKYEGYLKRQKNNIEQINRQSCKSLPQEINYEKIETLSLEARENLNKIKPK 612
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROM3 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus (strain MIT 9303) GN=mnmG PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 80/224 (35.71%), Postives = 109/224 (48.66%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYR+LTS RSE+RL+LR DNAD RLTPLG +LGLID RRW+++Q K + +EK+RL+ RI A+D P E +G +K S TL LL++P + L +HG + L+ ++ EIDIKY G++ R R LP +LDY ++TLS E+REKL+ V P Sbjct: 444 EPYRVLTS----------------------RSEYRLILRGDNADRRLTPLGYQLGLIDARRWQLFQSKQTALEDEKQRLEKQRIK-----------ASDPAAPALEAK--------------------TGAKIKGSITLADLLRRPGVHSADLIEHGLVDPELALGVREGAEIDIKYSGYLQRQQQQIDQLKRQSQRRLPANLDYANISTLSKEAREKLTAVGP 614
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus (strain MIT 9313) GN=mnmG PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26 Identity = 79/224 (35.27%), Postives = 110/224 (49.11%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYR+LTS RSE+RL+LR DNAD RLTPLG +LGLID RRW+++Q K + +EK+RL+ R+ A+D P E +G +K S TL LL++P ++ L +HG + L+ ++ EIDIKY G++ R R LP +LDY ++TLS E+REKL+ V P Sbjct: 444 EPYRVLTS----------------------RSEYRLILRGDNADRRLTPLGYQLGLIDARRWQLFQRKQTALEDEKQRLEKQRLK-----------ASDPAAPALEAK--------------------TGATIKGSITLADLLRRPGVRSADLIEHGLVDPELALGVREGAEIDIKYSGYLQRQQQQIDQLKRQSQRRLPANLDYANISTLSKEAREKLTAVGP 614
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROMP (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=mnmG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 76/224 (33.93%), Postives = 111/224 (49.55%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYR+LTS RSE+RL LR DNAD RLTPLG E+GLID+RRW ++ K+ + EE RL+ R+ K T+E +A + SG +K S+TL+ LLK+P++ Y ++ + L + + VEIDIKYEG++ R + L +++Y + TLSLE+RE L+K++P Sbjct: 440 EPYRVLTS----------------------RSEYRLTLRGDNADRRLTPLGFEIGLIDERRWLAHKKKMKSLKEENSRLENTRL--------------------------KCTDE-----IAKKIELDSGSKIKGSTTLKELLKRPNLHYSDFIRYDLVDKTLPISVIEGVEIDIKYEGYLKRQKNNIDQINRQSLKSLSSEINYDQIDTLSLEARENLNKIKP 610
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_SYMTH (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Symbiobacterium thermophilum GN=mnmG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 76/226 (33.63%), Postives = 104/226 (46.02%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRMLTS R+E R++LR DNA RLT GRE GL+DD RW+V+ + E+ RL T G ++ + RL P+K TLE LL++P ++YE L + G G L A + VE +KY G+I + R +PP LDY A+T LS+E+REKLS++RP+T Sbjct: 423 EPYRMLTS----------------------RAEFRMMLRQDNAHLRLTEKGREYGLVDDARWEVFVALRDGIEAERERLAR-------------------------------TVVGPAPEVQRVLERLGSAPLKAGVTLEQLLRRPEVRYEHLVEMGLGRPDLDEAIWREVETQVKYAGYIAKEQQQVDRMRRMEARRIPPTLDYQALTGLSMEAREKLSRIRPET 595
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROMA (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus GN=mnmG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24 Identity = 73/226 (32.30%), Postives = 109/226 (48.23%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYR+LTS RSE+RL+LR DNAD RLTPLG ++GL++D +W ++Q K + + +EK+RL+ RI +A + + SG +K S TL +LL++P + L +H N L ++ VEIDIKY G++ R R LP +++Y + TLS E+REKL+ +P+T Sbjct: 444 EPYRVLTS----------------------RSEYRLILRGDNADRRLTPLGYKVGLVNDYQWNIFQIKQSNMEKEKKRLEQQRIKD-------------------------------SDPIALKIEKESGASIKGSITLANLLRRPGMHMNNLIRHKLANNSLPLDVREGVEIDIKYSGYLKRQNLQIEQIKKQNKRALPSEVNYTNIKTLSQEAREKLNATQPKT 616
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROMT (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus (strain NATL2A) GN=mnmG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 75/226 (33.19%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYR+LTS RSE+RL+LR DNAD RLTPLG +LGLID+RRWK++ K +++EK RL+ RI + +KS +E + +G P+K S TL + L++ +I Y+ L + ++ VEIDIKY G++ R + LP +L+Y + TLS E+REKL+ +P++ Sbjct: 444 EPYRVLTS----------------------RSEYRLILRGDNADRRLTPLGYQLGLIDERRWKIFNAKQQLINQEKERLEKERIK----------------------ESDKSAKE---------IYSSTGTPIKGSLTLANFLRRTNIHYKDLITFNLTTQSIPLDVEEGVEIDIKYSGYLERQKAQINQLKQQSKKLLPKNLNYNNIETLSKEAREKLTISQPKS 616 The following BLAST results are available for this feature:
BLAST of CX292227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 345
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292227 ID=CX292227; Name=CX292227; organism=Citrus clementina; type=EST; length=695bpback to top |