CX292227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PROM1 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Prochlorococcus marinus (strain NATL1A) GN=mnmG PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24 Identity = 74/226 (32.74%), Postives = 109/226 (48.23%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYR+LTS RSE+RL+LR DNAD RLTPLG +LGLID+RRW ++ K +++EK RL D E+ E C A ++ +G P+K S TL + L++ +I Y+ L + + ++ VEIDIKY G++ R + LP +L+Y + TLS E+REKL+ +P++ Sbjct: 444 EPYRVLTS----------------------RSEYRLILRGDNADRRLTPLGYQLGLIDERRWNIFNAKQQLINQEKERL----------------------------DKERIKESDKC---AKEIFSSTGTPIKGSLTLANFLRRTNIHYKDLITYNLTTQSIPLDVEEAVEIDIKYSGYLERQKAQINQLKQQSKKLLPKNLNYNNIETLSKEAREKLTISQPKS 616
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_THIDA (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=mnmG PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23 Identity = 77/227 (33.92%), Postives = 106/227 (46.70%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQY-EILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RL LR DNAD RLT GR LG++DD RW + K V+ E RLK S+W+ N +LP A T+L GQP++ +L LL++P++ Y ++L G G G+ + VEI KY+G+I R LPPDLDY +T LS+E R++L +P+T Sbjct: 424 EPYRMFTS----------------------RAEYRLQLREDNADMRLTETGRALGVVDDARWDQFNRKRDEVARETERLK------------SVWV-NPAILP------------------ADAATQLIGQPIEREYSLFDLLRRPNLGYAQVLALPGGGAGVADVGVAEQVEIAAKYQGYIDRQNEEVDKHREQEGLRLPPDLDYTRLTGLSMEVRQRLQTAQPET 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_BORPE (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Bordetella pertussis GN=mnmG PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 76/234 (32.48%), Postives = 104/234 (44.44%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNG--------LLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RL LR DNAD RLT +GR LGL+DD RW + K V++E RLK S W+ N VLP + L G+ ++ +L LLK+P++ YE L + G L + + VE +KY G+I R +P+P D+DY A+T+LS E R+KL RP+T Sbjct: 425 EPYRMFTS----------------------RAEYRLSLREDNADLRLTEIGRRLGLVDDVRWDAFSRKRDAVAQEVERLK------------STWV-NPRVLPAHAAEA------------------LLGKAIEREYSLSDLLKRPNVSYEALMQARTDEGELLAGPGVLEDQVLAEQVETQVKYAGYIARQQDEVQKHLSHEQQPIPADIDYDAVTSLSFEVRQKLKTHRPET 605
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_BORPA (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Bordetella parapertussis GN=mnmG PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.366e-21 Identity = 76/234 (32.48%), Postives = 103/234 (44.02%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAE--------KQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RL LR DNAD RLT +GR LGL+DD RW + K V++E RLK S W+ N VLP + L G+ ++ +L LLK+P++ YE L + G L + VE +KY G+I R +P+P D+DY A+T+LS E R+KL RP+T Sbjct: 425 EPYRMFTS----------------------RAEYRLSLREDNADLRLTEIGRRLGLVDDVRWDAFSRKRDAVAQEVERLK------------STWV-NPRVLPAHAAEA------------------LLGKAIEREYSLSDLLKRPNVSYEALMQARTDEGELLAGPGVLEDDVLAEQVETQVKYAGYIARQQDEVQKHLSHEQQPIPADIDYDAVTSLSFEVRQKLKTHRPET 605
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_BORBR (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Bordetella bronchiseptica GN=mnmG PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.366e-21 Identity = 76/234 (32.48%), Postives = 103/234 (44.02%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAE--------KQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RL LR DNAD RLT +GR LGL+DD RW + K V++E RLK S W+ N VLP + L G+ ++ +L LLK+P++ YE L + G L + VE +KY G+I R +P+P D+DY A+T+LS E R+KL RP+T Sbjct: 425 EPYRMFTS----------------------RAEYRLSLREDNADLRLTEIGRRLGLVDDVRWDAFSRKRDAVAQEVERLK------------STWV-NPRVLPAHAAEA------------------LLGKAIEREYSLSDLLKRPNVSYEALMQARTDEGELLAGPGVLEDDVLAEQVETQVKYAGYIARQQDEVQKHLSHEQQPIPADIDYDAVTSLSFEVRQKLKTHRPET 605
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_VARPS (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Variovorax paradoxus (strain S110) GN=mnmG PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21 Identity = 78/231 (33.77%), Postives = 102/231 (44.16%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEIL-----DKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E RL LR DNAD RLT GR+LGL+DD RW + K VS E RLK S+W+ N LP +E + R+ G+ ++ L LL++P + YE L K+ G+ LS E + +EI KY G+I R + LP D DY + LS E R+KL K RP+T Sbjct: 430 EPYRMFTS----------------------RAEFRLQLREDNADMRLTEAGRKLGLVDDARWDAFSRKRDTVSRETERLK------------SIWV-NPRNLPAAESE------------------RVLGKAIEHEYNLADLLRRPDVNYETLMSLDGGKYSAGSP-LSEIEIEQIEISAKYSGYIERQHDEVERAAHFENLRLPADFDYSQVKALSFEVRQKLDKHRPET 606
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_NITMU (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mnmG PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21 Identity = 71/227 (31.28%), Postives = 106/227 (46.70%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQY-EILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RL LR DNAD RLT +GR LG+++D RW + KL +++E+ RLKT +S KS E D R+ G+ ++ +L LL++P++ Y E++ G G ++ A + VEI KY+G+I R LP DLDY + LS E ++KL++ +P+T Sbjct: 424 EPYRMFTS----------------------RAEYRLQLREDNADLRLTEVGRRLGVVNDARWVAFNIKLEAIAQEQNRLKTTWLS------------------------PKSLSE-------TDALRVIGKNIEHECSLHDLLRRPNVSYAELMTLPGAGEPVVDLAAAEQVEIQAKYQGYIERQKDEVARNAYYEDIRLPQDLDYKTVRGLSNEVQQKLNQFKPET 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_TOLAT (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=mnmG PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 71/227 (31.28%), Postives = 105/227 (46.26%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQY-EILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RLLLR DNAD RLTP+GRELGL++D RW + KL +++E++RL+ I + P +EG + ++ P+ ++LE LL++P + Y +++ G G G+ + +EI +KY G+I R LP DLDY + LS E KL+ +PQT Sbjct: 424 EPYRMFTS----------------------RAEYRLLLREDNADLRLTPVGRELGLVNDERWAFFNHKLEMMAQEQQRLQDTWIQPQH--------------PATEG-----------------LNKILKTPLSRPASLEDLLRRPEVNYQDLMAIEGVGPGIEHPQASEQIEIQVKYAGYIDRQQDEIDKQLRHEETLLPLDLDYSEVPGLSKEVCIKLNDTKPQT 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PSEHT (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mnmG PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 72/227 (31.72%), Postives = 103/227 (45.37%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQY-EILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RLLLR DNAD RLT GRELGL++D RW+ Y +K+ +++EK+R+K W+ D + V L P+ ++LE LL++P I+Y +++ G G+ ++A + VEI KY G+IVR LP + DY ++ LS E KL RP T Sbjct: 424 EPYRMFTS----------------------RAEYRLLLREDNADIRLTEKGRELGLVNDERWQAYNEKMEVIAKEKQRIK------------DTWIHKD-------------------HTMIDQVNALLKTPLTREASLEELLRRPEIRYNDLMAIDGLGSEFTNQAALEQVEIHTKYAGYIVRQQDEINKQLRHEQTILPKEFDYKTVSGLSNEVVAKLIDARPDT 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_VIBVU (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Vibrio vulnificus GN=mnmG PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21 Identity = 76/227 (33.48%), Postives = 100/227 (44.05%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDK-HGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+EHRLLLR DNAD RLT RELGL+DD RW + K+ + +E++RLK S WM P S G ++ +L P+ ++ E LL++P + YE L F L + VEI +KYEG+I R H LP DLDY + LS E KL+ +P+T Sbjct: 424 EPYRMFTS----------------------RAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK------------STWMN-----PASTG--------------IEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEAAEQVEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPET 597 The following BLAST results are available for this feature:
BLAST of CX292227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 345
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292227 ID=CX292227; Name=CX292227; organism=Citrus clementina; type=EST; length=695bpback to top |