CX292227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_DESVV (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=mnmG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 66/228 (28.95%), Postives = 94/228 (41.23%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAE--KQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+EHRLLLR +NAD+RLT GR LGL+DD W+ + K A L+S L L + + T + D+ +RL +L +L++P + + D F G+ A+ ++ E +KY G++ R LP D+DY + L+ E EKL KVRP T Sbjct: 429 EPYRMFTS----------------------RAEHRLLLRENNADARLTETGRALGLVDDTHWQRFSTKRA---------------ALHSLLDEL-------------ENRRITPDAAARDI---FSRLGEPAPTKGVSLADILRRPSL--TLPDLAPFWEGVTRFADDVREEAETIVKYSGYLARQQELVARSARMEDTVLPEDMDYTVIPGLTREIVEKLGKVRPHT 601
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_DESHD (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=mnmG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 64/226 (28.32%), Postives = 97/226 (42.92%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVE--IDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYR+LTS R+E+RL+LR DNAD RLTP GRE+GL+ D RW +Q K A ++E + +LW P++E LA + + PV + E L+++P I + + L E+ +E I+IKY G+I + R +P ++ Y + LS E R++L +V P Sbjct: 430 EPYRLLTS----------------------RAEYRLILRQDNADLRLTPRGREIGLVKDERWAAFQKKKAAIAE----------------INALWRGT-TFSPLNE-------------HLAEVLAGVHSAPVHGGISGEELMRRPEITINEIKQ--LIPQLAEYDEEALLEAGIEIKYAGYIEKQLAEIERFAKMEERMIPEEIVYDQIKGLSTEGRQRLKEVAP 601
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_DESHY (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Desulfitobacterium hafniense (strain Y51) GN=mnmG PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 64/226 (28.32%), Postives = 97/226 (42.92%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVE--IDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYR+LTS R+E+RL+LR DNAD RLTP GRE+GL+ D RW +Q K A ++E + +LW P++E LA + + PV + E L+++P I + + L E+ +E I+IKY G+I + R +P ++ Y + LS E R++L +V P Sbjct: 430 EPYRLLTS----------------------RAEYRLILRQDNADLRLTPRGREVGLVKDERWAAFQKKKAAIAE----------------INALWRGT-TFSPLNE-------------HLAEVLAGVHSAPVHGGISGEELMRRPEITINEIKQ--LIPQLAEYDEEALLEAGIEIKYAGYIEKQLAEIERFAKMEERMIPEEIVYDQIKGLSTEGRQRLKEVAP 601
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_CHLCH (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Chlorobium chlorochromatii (strain CaD3) GN=mnmG PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 69/226 (30.53%), Postives = 99/226 (43.81%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRI-SGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQ 690 EPYRM TS +EHRLLLR DNAD RL G +GL+ + R++ + K+ +++ K L +R+ SGL AN + + G+ + G A VT L +P + L + + H Q + N L+ + VEID KYEG++ R +P LDY+A+ LS E REKL K RP+ Sbjct: 420 EPYRMFTS----------------------SAEHRLLLRHDNADIRLHEFGYRVGLLPEHRYQATRQKIEQINAVKTLLSQIRLESGL---------ANKLLQELEYGE--------VTG--AQQVTTLLKRPRVTLAKLLATSPELHSQLSNIS----NNPLV----YEQVEIDCKYEGYLKRDALVAEKIQRLEAHHIPALLDYHAIAGLSNEGREKLKKHRPE 596
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_FLAJ1 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=mnmG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11 Identity = 60/226 (26.55%), Postives = 101/226 (44.69%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+R LLR DNAD RLTP+ E+GL + R + + KL +E ++ + + + + + + + P+S+GD + ++ +P LE +LK +E +D + N L +Q V I +KY G+I + +P + DY + ++S+E+++KLSK+RP T Sbjct: 423 EPYRMFTS----------------------RAEYRTLLRQDNADFRLTPMSFEIGLASEDRMRRMEHKL---NESEKMVAFFKETSVTVAETNPILIEKESAPISQGD---------------KMFKVFSRP---QIELEDMLK-----FEKVDSYIKENNLDEEIVEQAV-IQVKYSGYIEKERNNADKLNRLEEVKIPENFDYNKIKSMSIEAKQKLSKIRPVT 599 The following BLAST results are available for this feature:
BLAST of CX292227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 345
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292227 ID=CX292227; Name=CX292227; organism=Citrus clementina; type=EST; length=695bpback to top |