CX292227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_ALTMD (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=mnmG PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21 Identity = 73/227 (32.16%), Postives = 101/227 (44.49%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDK-HGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RLLLR DNADSRLT +GRE+GL+DD RW Y DK+ V E +RL+ I +++ P L + PV +LE L+++P + Y L K G G+ + VEI IKY G+I R + LP D+D+ ++ LS E KL++ RP+T Sbjct: 424 EPYRMFTS----------------------RAEYRLLLREDNADSRLTAMGREIGLVDDARWAKYNDKMEAVETELQRLRGQWIHPDHAATPQL-------------------------------NTMLKNPVSREHSLEELIRRPEMTYSQLMKIESVGPGIDDPIAAEQVEIQIKYAGYIARQMDEIAKTQRHENTLLPIDMDFSKISGLSNEVVAKLTEARPET 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PSYA2 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mnmG PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 74/226 (32.74%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RLLLR DNAD RLT GR+LGL+DD RW+ Y++K+ ++ E RLK +W P++ L A VT +G+ + ST LLK+P I + + G+ + S+ +Q +EI +KY G+I R + LP D DY ++ LS E +KL++VRP T Sbjct: 427 EPYRMFTS----------------------RAEYRLLLREDNADQRLTETGRKLGLVDDVRWQAYEEKMEAIASETSRLK------------DIW-----ATPINA--------------LGAQVTAQTGEVLSKESTAYDLLKRPQIHFNDIAAI-TGSEVDSQVGEQ-IEISVKYAGYIDRQQEDIDQMKRLENTALPMDFDYSVVSGLSNEIVQKLAQVRPST 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_ENT38 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Enterobacter sp. (strain 638) GN=mnmG PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 73/225 (32.44%), Postives = 101/225 (44.89%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYE-ILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYRM TS R+E+RL+LR DNAD RLT +GRELGL+DD RW + +KL R+ E++RLK+ ++ L D A+V P+ ++ E LL++P + YE ++ F GL + VEI IKYEG+I R + LP LDY +T LS E KL+ +P Sbjct: 424 EPYRMFTS----------------------RAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLERIETERQRLKSTWVNPL-------------------------------ADSVAEVNAHLAAPLSREASGEDLLRRPGMTYEQLVQMTPFAPGLDDAEAAEQVEIQIKYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKP 595
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_AERHH (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=mnmG PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21 Identity = 72/227 (31.72%), Postives = 102/227 (44.93%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYE-ILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RLLLR DNAD RLT +GRELGL+DD RW + K+ +V +E++R+++ I + SL + V L P+ +LE LL++P + Y+ ++ G G L A VEI IKY G+I R + LP D++Y + LS E KL+ +PQT Sbjct: 424 EPYRMFTS----------------------RAEYRLLLREDNADLRLTGIGRELGLVDDERWGKFNAKMEQVEQERQRMRSTWIHPQHPSLEA-------------------------------VNALVNTPLTREQSLEELLRRPEVTYDALMAIEGVGPALPDTAAADQVEIQIKYAGYIERQHDEVEKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPQT 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_MARAV (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=mnmG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 75/229 (32.75%), Postives = 105/229 (45.85%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSG---QPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RL+LR DNAD RLT GR+LGL+DD RW+ + +K +++E+ RL++ RI +TE G R +G QP+ +L LL++P I Y+ + + G Q VEI+IKYEG+I R + LP DLDY + LS E ++KL VRP+T Sbjct: 424 EPYRMFTS----------------------RAEYRLILREDNADLRLTETGRKLGLVDDERWQKFSEKCEGIAKERSRLESTRI-------------------------HPNTEAG---------ERANGYLKQPMTRDQSLAELLRRPEIVYDHIAEIGAERAEDPNVADQ-VEIEIKYEGYISRQADEIERLRKNENTALPLDLDYDVIGGLSNEIKQKLKDVRPET 595
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_VIBVY (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Vibrio vulnificus (strain YJ016) GN=mnmG PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 75/227 (33.04%), Postives = 100/227 (44.05%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDK-HGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+EHRLLLR DNAD RLT RELGL+DD RW + K+ + +E++RLK S WM P S G E + +L P+ ++ E LL++P + Y+ L F + + VEI +KYEG+I R H LP DLDY + LS E KL+ +P+T Sbjct: 424 EPYRMFTS----------------------RAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLK------------STWMN-----PASTGIDE--------------LNQLLKTPMNREASGEDLLRRPEMTYDQLTSLTAFAPAIDDLEAAEQVEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPET 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_VIBHB (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=mnmG PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 74/227 (32.60%), Postives = 102/227 (44.93%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQY-EILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RLLLR DNAD RLT RELGLIDD RW + +K+ + E++RLK S WM P S G E + +L P+ ++ E LL++P I Y ++ F L + + VEI +KY+G+I R H LP DLDY + LS E KL++ +P++ Sbjct: 424 EPYRMFTS----------------------RAEYRLLLREDNADLRLTEKARELGLIDDARWARFNEKIENMETERQRLK------------STWMN-----PNSAGIDE--------------LNKLLKTPMAREASGEDLLRRPEISYSDLTQLDAFAPALEDQQASEQVEIQVKYDGYIKRQQEEIEKSLRHEHTKLPADLDYKDVKGLSNEVVAKLTEAKPES 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_KLEP7 (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mnmG PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 76/227 (33.48%), Postives = 102/227 (44.93%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYE-ILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RL+LR DNAD RLT GRELGL+DD RW Y +KL + E++RLK S W V P +E A +V P+ ++ E LL++P + YE ++ F GL R + VEI +KYEG+I R + LP LDY +T LS E KL+ +P + Sbjct: 424 EPYRMFTS----------------------RAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRLK------------STW-----VNPQAES--------------ANEVNAHLTAPLSREASGEDLLRRPEMTYEQLVQLSPFTPGLEDRQAAEQVEIQVKYEGYIARQQDEIEKQQRNENTLLPATLDYRQVTGLSNEVIAKLNDHKPSS 597
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_SHIDS (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=mnmG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20 Identity = 72/225 (32.00%), Postives = 101/225 (44.89%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDK-HGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRP 687 EPYRM TS R+E+RL+LR DNAD RLT +GRELGL+DD RW + +KL + E++RLK+ R++ PS + AA+V P+ ++ E LL++P + YE L F L + VEI +KYEG+I R + LP LDY ++ LS E KL+ +P Sbjct: 424 EPYRMFTS----------------------RAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTRVT------PS-------------------------AEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKP 595
BLAST of CX292227 vs. ExPASy Swiss-Prot
Match: MNMG_PSYWF (tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Psychrobacter sp. (strain PRwf-1) GN=mnmG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20 Identity = 72/226 (31.86%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 16 EPYRMLTSLGTEKCPTV**SCD*KENTVESRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGLYSSLPSLWMANDCVLPVSEGDGEKSTEEGICGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRXXXXXXXXXXXXHRPLPPDLDYYAMTTLSLESREKLSKVRPQT 693 EPYRM TS R+E+RLLLR DNAD RLT +GR+LGL+DD RW+ YQ K+ ++ E RLK LW L G+K TE+ +G+ + +T LLK+P++ + D ++ + +EI +KY G+I R + LP D DY A++ LS E +KL+ +RP T Sbjct: 438 EPYRMFTS----------------------RAEYRLLLREDNADQRLTEIGRKLGLVDDTRWQAYQQKMESMATESARLK------------DLWATPHNEL------GKKFTEQ-------------TGEVLSKEATAYDLLKRPNVGFN--DIAAVTGAQVAADVGEQIEISVKYAGYIDRQQEDIDQMKRLENTQLPADFDYKAVSGLSNEIVQKLNDIRPAT 608 The following BLAST results are available for this feature:
BLAST of CX292227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 345
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292227 ID=CX292227; Name=CX292227; organism=Citrus clementina; type=EST; length=695bpback to top |