CX292277

Overview
NameCX292277
Unique NameCX292277
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: REDB_DICDI (NADPH oxidoreductase B OS=Dictyostelium discoideum GN=redB PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.389e-25
Identity = 73/220 (33.18%), Postives = 112/220 (50.91%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADA--KVPIIMIGPGTGLAPFRGFL 658
            VE+ +  LG++ D   +L    ++G     S +  +F P ++R A +++                       E  RL +LA+    +EY ++I    R +++++  FP  +P L   F    PRL  R YSISSSP      + +T  +V   T   R H G+ STW+ +    +K       P+FVR+S+FKLP+ A  + P+IM+GPGTGLAPFRGFL
Sbjct:  329 VEQLIKRLGVNGDDMIALVPIDQEG-----SVIKASFGPMTIRRAFSEHLDITNPVRKSVLRALAESTTNEEEKKRLLYLATEEANEEYNKYIKNDFRGVVDLLESFPGLQP-LIAHFLEFTPRLPARMYSISSSPHNKNGVVSITSVVVNFTTGNQRAHNGVASTWLSHLKVGDK------VPLFVRESHFKLPSAATEQKPVIMVGPGTGLAPFRGFL 536          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NDOR1_BOVIN (NADPH-dependent diflavin oxidoreductase 1 (Fragment) OS=Bos taurus GN=NDOR1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.322e-25
Identity = 69/219 (31.51%), Postives = 113/219 (51.60%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFP---SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFR 649
            V++    LGL P+ +F+L   +E G      T P   P PCS+R  +++Y                       E ++LR   S  G++E  ++    +R+ LEV+ +FP   +A PP   +   ++P ++PR +SI+SS R  PSR+H+  A+V  +T      +GLCS+W+ +   ++ +      P++VR      P    VP+IM+GPGTG+APFR
Sbjct:  259 VQQFCQALGLDPEQHFTLQP-REPGV-----TCPTRLPQPCSVRRLVSQYLDIASVPRRSFFELLACLSPHELEREKLREFGSARGQEELCEYCTRPRRTALEVLCDFPHTAAAVPP--DYLLDLLPLIRPRAFSIASSLRAHPSRLHILVAVVQYQTRLREPRRGLCSSWLAS---LDPAQGPVRVPLWVRSGGLTFPKTPDVPVIMVGPGTGVAPFR 466          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NOS3_RAT (Nitric oxide synthase, endothelial OS=Rattus norvegicus GN=Nos3 PE=2 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25
Identity = 73/201 (36.32%), Postives = 102/201 (50.75%), Query Frame = 2
Query:   71 EDGTPLGKS---TLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGF 655
            E G+P G        P  PPC+LR ALT +                      +E   L  L+    + E  +W      +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTWM       K+ D    P F+R + +F+LP D  +P I++GPGTG+APFRGF
Sbjct:  832 EKGSPGGPPPGWVRDPRLPPCTLRQALTYFLDITSPPSPRLLRLLSTLAEESSEQQELEALSQDPRRYEEWKWFRCP--TLLEVLEQFPSVALPAPLILTQL-PLLQPRYYSVSSAPSAHPGEIHLTVAVLAYRTQDGLGPLHYGVCSTWMSQL----KAGDP--VPCFIRGAPSFRLPPDPNLPCILVGPGTGIAPFRGF 1023          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NOS3_HUMAN (Nitric oxide synthase, endothelial OS=Homo sapiens GN=NOS3 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 9.078e-25
Identity = 71/201 (35.32%), Postives = 100/201 (49.75%), Query Frame = 2
Query:   71 EDGTPLGKS---TLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGF 655
            E G+P G        P  PPC+LR ALT +                       E   L  L+    + E  +W      +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTW+    P +        P F+R + +F+LP D  +P I++GPGTG+APFRGF
Sbjct:  833 EKGSPGGPPPGWVRDPRLPPCTLRQALTFFLDITSPPSPQLLRLLSTLAEEPREQQELEALSQDPRRYEEWKWFRCP--TLLEVLEQFPSVALPAPLLLTQL-PLLQPRYYSVSSAPSTHPGEIHLTVAVLAYRTQDGLGPLHYGVCSTWLSQLKPGDP------VPCFIRGAPSFRLPPDPSLPCILVGPGTGIAPFRGF 1024          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NOS3_BOVIN (Nitric oxide synthase, endothelial OS=Bos taurus GN=NOS3 PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.186e-24
Identity = 78/224 (34.82%), Postives = 112/224 (50.00%), Query Frame = 2
Query:    5 VEEALSLLGLSPDTYFSLHTDK-EDGTPLGKS---TLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGF 655
            VE  LS +   P    S+  ++ E G+P G        P  PPC+LR ALT +                      +E   L  L+    + E  +W      +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  +H+T A++  +T  G   +H G+CSTW+       K+ D    P F+R + +F+LP D  VP I++GPGTG+APFRGF
Sbjct:  812 VEALLSRVEDPPPPTESVAVEQLEKGSPGGPPPSWVRDPRLPPCTLRQALTFFLDITSPPSPRLLRLLSTLAEEPSEQQELETLSQDPRRYEEWKWFRCP--TLLEVLEQFPSVALPAPLLLTQL-PLLQPRYYSVSSAPNAHPGEVHLTVAVLAYRTQDGLGPLHYGVCSTWLSQL----KTGDP--VPCFIRGAPSFRLPPDPYVPCILVGPGTGIAPFRGF 1026          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NOS3_CANFA (Nitric oxide synthase, endothelial OS=Canis familiaris GN=NOS3 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24
Identity = 72/201 (35.82%), Postives = 102/201 (50.75%), Query Frame = 2
Query:   71 EDGTPLGKS---TLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGF 655
            E G+P G        P  PPC+LR ALT +                      +E   L  L+    + E  +W      +LLEV+ +FPS   P  +    + P LQPRYYS+SS+P   P  IH+T A++  +T  G   +H G+CSTW+       K+ D    P F+R + +F+LP D  +P I++GPGTG+APFRGF
Sbjct:  835 EKGSPGGPPPSWVRDPRLPPCTLRQALTFFLDITSPPSPQLLRLLSTLAEESSEQQELESLSQDPRRYEEWKWFRCP--TLLEVLEQFPSVALPAPLLLTQL-PLLQPRYYSVSSAPSAHPGEIHLTVAVLAYRTQDGLGPLHYGVCSTWLSQL----KAGDP--VPCFIRGAPSFRLPPDPSLPCILVGPGTGIAPFRGF 1026          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NOS_LYMST (Nitric oxide synthase OS=Lymnaea stagnalis GN=NOS PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.685e-24
Identity = 75/212 (35.38%), Postives = 105/212 (49.53%), Query Frame = 2
Query:   29 GLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGF 655
            G SPD         + GT     T     P C+ RTA +                         +  +L  LAS    + Y +W +    ++LE++ EFPS K P  +    + P LQPRYYSISSS +  P+ +H T A+V  KT  G   VH+G+CS+W+  S P+      +  P F+R + +F LP D  +PIIMIGPG+G+APFR F
Sbjct:  726 GPSPDQVVKTEISTQLGT---NDTWRSHLPICTSRTAFSFLLDVTTPPSQEILQVLATQASSDMDKHKLEQLAS--NSEAYEKWRLDLSPNILEILDEFPSLKIPPSLLLTQL-PLLQPRYYSISSSQQKNPNEVHATIAVVRFKTQDGDGPVHEGVCSSWLNRS-PIG-----TVVPCFLRSAPHFHLPEDPSLPIIMIGPGSGIAPFRSF 925          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NOS_ANOST (Nitric oxide synthase OS=Anopheles stephensi PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 79/212 (37.26%), Postives = 107/212 (50.47%), Query Frame = 2
Query:   38 PDTYFSLHTDKEDGTPLG--KSTLP-PTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGF 655
            PD    L   KE  T  G  KS  P    P C+LRT LT++                       + +RL  LA+ +    Y  W       LLEV+ EFPS +PP  VF A +   LQPR+YSISSSPR   + IH+T A+V  +   G    H G+CS ++ N     +S+D  +  +FVR + +F +  D   P+I+IGPGTG+APFR F
Sbjct:  885 PDEMLQLQVLKEKQTQNGVYKSWEPHERLPVCTLRTLLTRFLDITTPPTRQLLTYLASCCGDKADEERLLMLANESSV--YEDWRYWKLPHLLEVLEEFPSCRPPAAVFVAQL-NALQPRFYSISSSPRKYSNEIHLTVAIVTYRAEDGEGAEHYGVCSNYLANL----QSDDKIY--LFVRSAPSFHMSKDRTKPVILIGPGTGIAPFRSF 1087          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NCPR_SALTR (NADPH--cytochrome P450 reductase (Fragments) OS=Salmo trutta PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.920e-23
Identity = 68/214 (31.78%), Postives = 104/214 (48.60%), Query Frame = 2
Query:   23 LLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLAS--PAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFL 658
            +LG+  D+  SL+   E+         P T+     RTALT Y                       + +    +AS  P GK  Y  +++   R++L ++ + PS +PP+      ++PRLQ RYYSI+SS +V P+ IH+   LV   T      KG+ +TW+K                ++R+S F+LP  A  P+IM+GPGTG+APF GF+
Sbjct:  282 ILGVDLDSVISLNNLDEESNKKHPFPCPTTY-----RTALTHYLDIIHPPRTNVLYELAQYATDLKDQENTDSMASSAPEGKALYQSFVLEDNRNILAILEDLPSLRPPID-HLCELMPRLQARYYSIASSSKVHPNSIHICAVLVEYXT------KGVATTWLK----------------YIRKSQFRLPFKASNPVIMVGPGTGIAPFMGFI 467          
BLAST of CX292277 vs. ExPASy Swiss-Prot
Match: NOS1_RABIT (Nitric oxide synthase, brain OS=Oryctolagus cuniculus GN=NOS1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23
Identity = 65/186 (34.95%), Postives = 96/186 (51.61%), Query Frame = 2
Query:  107 PTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALV--YEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGF 655
            P  PPC++  A   Y                       E  RL  L+   G  EY +W      +++EV+ EFPS + P  +    +   LQPRYYSISSSP + P  +H+T A+V  + +   G +H G+CS+W+ N +P ++       P FVR + +F+LP + +VP I++GPGT  APFR F
Sbjct: 1089 PRLPPCTVFQAFKYYLDITTPPTPLQLQQFASLASNEKEKQRLLVLSK--GLQEYEEWKWGKNPTIVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPIHHGVCSSWL-NRIPADEV-----VPCFVRGAPSFRLPRNPQVPCILVGPGTAFAPFRSF 1265          
The following BLAST results are available for this feature:
BLAST of CX292277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
REDB_DICDI2.389e-2533.18NADPH oxidoreductase B OS=Dictyostelium discoideum... [more]
NDOR1_BOVIN5.322e-2531.51NADPH-dependent diflavin oxidoreductase 1 (Fragmen... [more]
NOS3_RAT6.951e-2536.32Nitric oxide synthase, endothelial OS=Rattus norve... [more]
NOS3_HUMAN9.078e-2535.32Nitric oxide synthase, endothelial OS=Homo sapiens... [more]
NOS3_BOVIN1.186e-2434.82Nitric oxide synthase, endothelial OS=Bos taurus G... [more]
NOS3_CANFA1.549e-2435.82Nitric oxide synthase, endothelial OS=Canis famili... [more]
NOS_LYMST7.685e-2435.38Nitric oxide synthase OS=Lymnaea stagnalis GN=NOS ... [more]
NOS_ANOST1.712e-2337.26Nitric oxide synthase OS=Anopheles stephensi PE=2 ... [more]
NCPR_SALTR2.920e-2331.78NADPH--cytochrome P450 reductase (Fragments) OS=Sa... [more]
NOS1_RABIT3.814e-2334.95Nitric oxide synthase, brain OS=Oryctolagus cunicu... [more]

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Properties
Property NameValue
Genbank descriptionC04013E05SK FlavFr1 Citrus clementina cDNA clone C04013E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292277 ID=CX292277; Name=CX292277; organism=Citrus clementina; type=EST; length=659bp
GACCGTGGAGGAGGCATTGTCATTATTAGGCCTATCACCAGACACTTATT
TTTCCCTTCATACTGATAAAGAGGATGGCACACCACTTGGTAAAAGCACC
TTGCCTCCCACTTTCCCACCGTGCTCTTTAAGAACAGCATTAACTAAATA
TGCTGATCTTTTGAGCTCCCCAAAGAAGTCTGCATTACTTGCCTTAGCAG
CTCATGCATCTGACCCCACTGAAGCAGATCGGTTAAGACATCTTGCATCA
CCTGCTGGAAAGGATGAATATGCACAATGGATTGTTGCAAGTCAGAGAAG
CCTTCTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTG
TCTTTTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATT
TCATCTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCT
GGTTTATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCA
CTTGGATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGG
GCACCCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAA
AGTGCCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGG
GTTTCCTAC
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