CX292404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292404 vs. ExPASy Swiss-Prot
Match: VATE_NEUCR (V-type proton ATPase subunit E OS=Neurospora crassa GN=vma-4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.842e-22 Identity = 52/139 (37.41%), Postives = 88/139 (63.31%), Query Frame = 3 Query: 147 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDH 563 ++D V +++++M FI+QEAEEKA EI + A+EEF IEK +LV E I Y +K KQ ++ ++I S N +R++VL A+ +L+ + EAAS ++ + D YK +L+ LI++ + EP +++R R+ D+ Sbjct: 7 LSDDQVGQELRKMTAFIKQEAEEKAREIQIKADEEFAIEKSKLVRQETDAIDSAYAKKFKQAQMSQQITRSTMANKTRLRVLGARQELLDEIFEAASAQLGQATHDLGRYKDILRDLILEGFYAMNEPELVIRARQADY 145
BLAST of CX292404 vs. ExPASy Swiss-Prot
Match: VATE_CANAL (V-type proton ATPase subunit E OS=Candida albicans GN=VMA4 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.841e-20 Identity = 47/138 (34.06%), Postives = 84/138 (60.87%), Query Frame = 3 Query: 147 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDD 560 ++D V ++ +M FI +EA+EKA EI + A+EE+ IEK +V +E I YE+K K+ + ++I S N +R+++L +D+++ + + A E+ +++D YK +L GLI + +L L EP V ++ R+ D Sbjct: 3 LSDEQVKSELSKMQAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYEQKLKKASLAQQITKSTIGNKTRLRILSTKDEVLHEIFDEAEAELKKITKDKKQYKPVLVGLIEEGVLALMEPKVSIKVREQD 140
BLAST of CX292404 vs. ExPASy Swiss-Prot
Match: VATE_YEAST (V-type proton ATPase subunit E OS=Saccharomyces cerevisiae GN=VMA4 PE=1 SV=4) HSP 1 Score: 90.1225 bits (222), Expect = 8.009e-18 Identity = 47/150 (31.33%), Postives = 89/150 (59.33%), Query Frame = 3 Query: 111 INNLIKSKDPAKMNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDD 560 +++ I + P ++ND ++ +M FIR+EAEEKA EI + A++E+ IEK +V E I ++ K K+ + ++I S N R+KVL A++ + + E +++ ++ + + YK +L+ LIV++LL+L EP +++ + D Sbjct: 1 MSSAITALTPNQVND-----ELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLKKAMLSQQITKSTIANKMRLKVLSAREQSLDGIFEETKEKLSGIANNRDEYKPILQSLIVEALLKLLEPKAIVKALERD 145
BLAST of CX292404 vs. ExPASy Swiss-Prot
Match: VATE_SCHPO (V-type proton ATPase subunit E OS=Schizosaccharomyces pombe GN=vma4 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.366e-17 Identity = 46/138 (33.33%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 147 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDD 560 ++D V ++ +MV FI+QEA EKA EI +EEEF +EK ++V + I Q Y+ K K+ + +KI S LN SR+++L ++ ++ ++ K++ + + ++Y K + LIVQ++ L EP ++ R+ D Sbjct: 3 LSDEQVQAEMHKMVSFIKQEALEKAKEIHTLSEEEFQVEKAKIVREQCDAIDQTYDMKLKRASMAQKIAKSNVLNKSRLEILNSKQKVIDDIFSRVEKKLDGIEQKKDAYTKFMADLIVQAMELLGEPVGIVYSRQRD 140 The following BLAST results are available for this feature:
BLAST of CX292404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292404 ID=CX292404; Name=CX292404; organism=Citrus clementina; type=EST; length=567bpback to top |