CX292407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.326e-16 Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 1 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 276 +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+ ++ RL +DI + GY+P YGARPL RAI + +ED+++E +L Sbjct: 691 KELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.326e-16 Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 4 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 288 E+K F+PEFLNR+D++I+FR L+ +K+I DI L++V +RL+ ++I L+ GY+P YGARPL+R I +LE +A+K++A EI Sbjct: 752 EMKLRFKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGEI 846
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPB_WOLSU (Chaperone protein clpB OS=Wolinella succinogenes GN=clpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16 Identity = 41/97 (42.27%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 4 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 294 ELK+YF+PEFLNRLD++I+F L ++ EI +IM + + ++LK + I L+ G++P YGARPL+RA+ +ED +AE +L +I E Sbjct: 744 ELKRYFKPEFLNRLDDIIIFNPLGLAQIVEIVEIMFEGIREKLKERQITLELTQSAKEQIAEVGFDPVYGARPLKRALYEEVEDRLAELILEDKISE 840
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16 Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 4 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 294 +LK YF+PEFLNRLDE I+F+ L K ++K+I + + +V RLK K +E++ GYNP YGARP++R I LE +A+ +L + +E Sbjct: 752 QLKNYFKPEFLNRLDEQIIFKSLKKEDLKKIVKLQIDKVKARLKDKGLEIELNEKVIDWIADKGYNPIYGARPIKRIIQTKLETKLAKMILKSKSEE 848
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.262e-16 Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 1 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 276 +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + GY+P YGARPL RAI + +ED+++E +L Sbjct: 691 KELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.262e-16 Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 1 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKML 276 +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+ ++ RL ++I + GY+P YGARPL RAI + +ED+++E +L Sbjct: 691 KELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELIL 782
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.954e-16 Identity = 42/98 (42.86%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 1 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 294 E LK FRPEFLNRLD+ I+FR L K E++ I + ++ + RL+ + ++LQ G++P YGARPL+RAI R LE +A+ +LA ++ E Sbjct: 749 EALKAKFRPEFLNRLDDQIIFRSLEKEELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETPIAKAILAGQLSE 846
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 8.595e-16 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 7 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 294 L+Q+FRPEFLNRLDE++VFR L + ++ I I L+ V RL + I L+ GY+P +GARPL+R I R LE ++ K+LA E+ + Sbjct: 736 LQQHFRPEFLNRLDEIVVFRPLAREQIAAIVQIQLEAVRKRLAERRITLELSQEALDFLAQRGYDPVFGARPLKRVIQRELETPLSRKILAGEVAD 831
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.122e-15 Identity = 38/91 (41.76%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 7 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLA 279 L YFRPEFLNR+DE+++F++LT+ ++ I DI L+ V +RL+++ I+L+ GY+ ++GARPL+RAI LE+++A ++L+ Sbjct: 763 LHTYFRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALAREILS 853
BLAST of CX292407 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.466e-15 Identity = 41/98 (41.84%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 1 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 294 EELKQ F PEFLNR+D++IVF L+K ++K+I +IMLKE+ + +K ++I + G++ YGAR LRRAI + +ED ++ ++L I++ Sbjct: 700 EELKQNFNPEFLNRIDDIIVFHTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIEDYVSTEILFGNIED 797 The following BLAST results are available for this feature:
BLAST of CX292407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292407 ID=CX292407; Name=CX292407; organism=Citrus clementina; type=EST; length=482bpback to top |