CX292425

Overview
NameCX292425
Unique NameCX292425
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length457
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: FKBP5_RHIOR (FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP5 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.569e-12
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 3
Query:   42 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALE 359
            +GN LFK      A   Y K  +YI+       EE ++A+ L V+  LN  AC LKLK Y  A ++C K LD D   +KA YR  QAY++  D + +   I+  LE
Sbjct:  134 EGNALFKLDAIESALFAYRKGREYIQDLWDCEPEELEEARQLIVSIQLNIGACHLKLKHYDHAIEVCQKALDRDMTKIKAYYRIGQAYMEKGDYESSLTFIRIGLE 239          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: FKBP8_MOUSE (FK506-binding protein 8 OS=Mus musculus GN=Fkbp8 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 8.579e-12
Identity = 41/137 (29.93%), Postives = 70/137 (51.09%), Query Frame = 3
Query:   45 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNMIEAKFY 449
            GN  ++   +  A+  Y+ A+K I  +T      EE+++   LKV C  N AA +LKL  Y+ A + C++VL+    N+KAL+R+ +   Q  +   A   ++ AL+++P N+ +  E   L +K       E   Y
Sbjct:  218 GNAHYQRADFVLAANSYDLAIKAITSNTKVDMTCEEEEELLQLKVKCLNNLAASQLKLDHYRAALRSCSQVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKRAAQRSTETALY 354          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: TANC1_HUMAN (Protein TANC1 OS=Homo sapiens GN=TANC1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.911e-11
Identity = 38/127 (29.92%), Postives = 73/127 (57.48%), Query Frame = 3
Query:   42 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 422
            +GN ++K GK   A++RY+ A++    +  FG E+ +    L+V+  LN + C+ K  D+  AE+  +K L+L  ++ +A Y RA+A         A  D+++A+++ P N++VK     ++E+ K+
Sbjct: 1295 EGNVMYKKGKMKEAAQRYQYALRKFPRE-GFG-EDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELKPKSYEAFYARARAKRNSRQFVAALADLQEAVKLCPTNQEVKRLLARVEEECKQ 1419          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: UN45B_MOUSE (Protein unc-45 homolog B OS=Mus musculus GN=Unc45b PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.496e-11
Identity = 39/127 (30.71%), Postives = 66/127 (51.97%), Query Frame = 3
Query:   42 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 422
            +GN  F+   Y  A+K Y +A+K  +             KAL      N AAC LK++ Y QA    ++ +D++S ++KALYRR QA   +  LD A  D+++   ++P N++ +   + L   ++E
Sbjct:   12 EGNRHFQLQDYKAATKSYSQALKLTK------------DKALLATLYRNRAACGLKMESYAQAASDASRAIDINSADIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQETLRRLNTSIQE 126          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: FKBP8_HUMAN (FK506-binding protein 8 OS=Homo sapiens GN=FKBP8 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.496e-11
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 3
Query:   45 GNTLFKAGKYARASKRYEKAVKYI----EYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNMIEAKFY 449
            GN  ++   +  A+  Y+ A+K I    + D +F  EE+ Q   LKV C  N AA +LKL  Y+ A + C+ VL+    N+KAL+R+ +   Q  +   A   ++ AL+++P N+ +  E   L +K       E   Y
Sbjct:  228 GNAHYQRADFVLAANSYDLAIKAITSSAKVDMTF--EEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALY 364          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: TOM34_PONAB (Mitochondrial import receptor subunit TOM34 OS=Pongo abelii GN=TOMM34 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.260e-11
Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 3
Query:   42 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 416
            +GN L K G + +A ++Y +++                   L+ A   N A C L LK Y +A K CT+ L LD +NVKA YRRAQA+  + D   +  DI   L+I+P N   +   + +K+ +
Sbjct:  199 EGNELVKKGNHKKAIEKYSESLL---------------CSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRNGPAQKLRQEVKQNL 308          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: TOM34_HUMAN (Mitochondrial import receptor subunit TOM34 OS=Homo sapiens GN=TOMM34 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.260e-11
Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 3
Query:   42 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 416
            +GN L K G + +A ++Y +++                   L+ A   N A C L LK Y +A K CT+ L LD +NVKA YRRAQA+  + D   +  DI   L+I+P N   +   + +K+ +
Sbjct:  199 EGNELVKKGNHKKAIEKYSESLL---------------CSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRNGPAQKLRQEVKQNL 308          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: FKBP8_RAT (FK506-binding protein 8 OS=Rattus norvegicus GN=Fkbp8 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.260e-11
Identity = 40/137 (29.20%), Postives = 69/137 (50.36%), Query Frame = 3
Query:   45 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNMIEAKFY 449
            GN  ++   +  A+  Y+ A+K I  +       EE+++   LKV C  N AA +LKL  Y+ A + C++VL+    N+KAL+R+ +   Q  +   A   ++ AL+++P N+ +  E   L +K       E   Y
Sbjct:  219 GNAHYQRADFVLAANSYDLAIKAITSNAKVDMTCEEEEELLQLKVKCLNNLAASQLKLDHYRAALRSCSQVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKRAAQRSTETALY 355          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11
Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = 3
Query:   45 GNTLFKAGKYARASKRYEKAVKYIE--YDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN----VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN 428
            G   FK   Y+ A ++Y K  K+++  +      E+ ++   LKV+  LN A C LKLKDYKQ     ++VL  ++ +     KALYRR  AY  + D D+A  D++ A    P++  +       K K K+ N
Sbjct:  226 GTEQFKKQNYSVALEKYVKCDKFLKEYFPEDLEKEQIEKINQLKVSIPLNIAICALKLKDYKQVLVASSEVLYAEAADEKAKAKALYRRGLAYYHVNDTDMALNDLEMATTFQPNDAAILKAIHNTKLKRKQQN 359          
BLAST of CX292425 vs. ExPASy Swiss-Prot
Match: TANC1_RAT (Protein TANC1 OS=Rattus norvegicus GN=Tanc1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11
Identity = 35/127 (27.56%), Postives = 72/127 (56.69%), Query Frame = 3
Query:   42 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 422
            +GN ++K GK   A++RY+ A++  ++      E+ +    L+V+  LN + C+ K  D+  AE+  +K L+L  ++ +A Y RA+A         A  D+++A+++ P N+++K     ++E+ K+
Sbjct: 1285 EGNVMYKKGKMKEAAQRYQYALR--KFPREGPGEDMRPFNELRVSLYLNLSRCRRKTNDFGLAEEFASKALELKPKSYEAFYARARAKRNSRQFLAALADLQEAVKLCPTNQEIKRLLARVEEECKQ 1409          
The following BLAST results are available for this feature:
BLAST of CX292425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
FKBP5_RHIOR6.569e-1238.68FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP... [more]
FKBP8_MOUSE8.579e-1229.93FK506-binding protein 8 OS=Mus musculus GN=Fkbp8 P... [more]
TANC1_HUMAN1.911e-1129.92Protein TANC1 OS=Homo sapiens GN=TANC1 PE=1 SV=2[more]
UN45B_MOUSE2.496e-1130.71Protein unc-45 homolog B OS=Mus musculus GN=Unc45b... [more]
FKBP8_HUMAN2.496e-1130.94FK506-binding protein 8 OS=Homo sapiens GN=FKBP8 P... [more]
TOM34_PONAB3.260e-1132.80Mitochondrial import receptor subunit TOM34 OS=Pon... [more]
TOM34_HUMAN3.260e-1132.80Mitochondrial import receptor subunit TOM34 OS=Hom... [more]
FKBP8_RAT3.260e-1129.20FK506-binding protein 8 OS=Rattus norvegicus GN=Fk... [more]
PPID_YEAST4.258e-1132.84Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
TANC1_RAT9.486e-1127.56Protein TANC1 OS=Rattus norvegicus GN=Tanc1 PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04015E12SK FlavFr1 Citrus clementina cDNA clone C04015E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292425 ID=CX292425; Name=CX292425; organism=Citrus clementina; type=EST; length=457bp
ATACTGAGGAAAAGATTGAAGCCGCGGGGAAGAAGAAGGAACAAGGGAAT
ACATTGTTTAAGGCAGGCAAATATGCAAGAGCCTCAAAGAGATATGAGAA
AGCTGTCAAGTACATCGAGTATGATACTTCCTTTGGTGACGAAGAGAAAA
AACAGGCAAAGGCATTGAAAGTTGCTTGCAATCTCAATAATGCTGCTTGC
AAATTGAAACTCAAGGATTACAAGCAGGCAGAAAAATTATGCACCAAGGT
GCTTGACTTGGATAGTAGAAATGTGAAAGCTCTGTACAGAAGGGCTCAGG
CATACATTCAGATGGCAGATTTAGATTTGGCAGAGTTTGATATCAAGAAA
GCACTTGAGATTGATCCTGATAACAGGGATGTCAAGTTGGAGTACAAAAC
TTTGAAGGAGAAGATGAAGGAATACAACATGATAGAGGCTAAGTTTTATG
GCAACAT
back to top