CX292440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 3.295e-42 Identity = 85/162 (52.47%), Postives = 107/162 (66.05%), Query Frame = 1 Query: 61 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 KFFVGGNWKCNGT E + K+VS LN A KS L V+AQN W+ KGGAFTGE+SAE LV++ WVILGHSERR ++ E ++F+G K AYALS+ LKV+AC+GE LE+RE+G T V +Q KA A+ I++W NVV+AY Sbjct: 48 KFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQV--KSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAY 207
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.644e-41 Identity = 85/180 (47.22%), Postives = 109/180 (60.56%), Query Frame = 1 Query: 7 SSRFHRQTKQNSIVVMARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 SS HR + + + KFFVGGNWKCNGT + + K++S LN A KS L ++ QN WV KGGAFTGE+S E L +L WVILGHSERR ++ E ++F+G K AYALS GL VIAC+GE LE+RE+G T V Q KA A+ + +WDN+V+AY Sbjct: 47 SSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQV--KSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAY 224
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.261e-40 Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 40 SIVVMAR--KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 ++V MA KFFVGGNWKCNGT + + K+VS LN A+ KS L ++ QN WV KGGAFTGE+S E L ++ WVILGHSERR ++ E + F+G K AYAL+ GL VIAC+GE LE+RE+G T V EQ KA A+ + +W+N+V+AY Sbjct: 55 AVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQV--KSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAY 223
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.192e-37 Identity = 81/165 (49.09%), Postives = 102/165 (61.82%), Query Frame = 1 Query: 52 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 M RKF VGGNWK NG + + L +S L VAAQNC+ GAFTGE+S ML +L+I WVILGHSERRA+ ES++ + DKVA+AL+ GLKVIAC+GETL++RE+G T AV QTKAIA+K+ +W NVV+AY Sbjct: 1 MGRKFCVGGNWKMNGDKASIADLCKVLTTGPLNADTEVVVGCPAPYLTLA--RSQLPDSVCVAAQNCYKVPKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIADKVKDWSNVVIAY 163
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.702e-36 Identity = 77/166 (46.39%), Postives = 102/166 (61.45%), Query Frame = 1 Query: 52 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN-WDNVVLAY 546 M RKF VGGNWK NG ++ +IV+ L + K+++ + VAAQNCW GAFTGE+S M+ ++ + WVILGHSERR + E ++ V +KVA+AL GLKVIAC+GETLE+RESG T VV Q KA+ I + W+N+VLAY Sbjct: 1 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYV--KTIIPDNVEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAY 164
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 6.020e-36 Identity = 78/163 (47.85%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 RKFFVGGNWK NG + + +++ TLN A+ K L + VAAQNC+ GAFTGE+S M+ ++ WVILGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTKAIA+ + +W VVLAY Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQK--LDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAY 164
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_PIG (Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE=2 SV=4) HSP 1 Score: 149.828 bits (377), Expect = 7.862e-36 Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 ARKFFVGGNWK NG + ++++TLN A+ K L VAAQNC+ GAFTGE+ M+ +L WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W+ VVLAY Sbjct: 4 ARKFFVGGNWKMNGRKNNLGELINTLNAAKLPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVANGAFTGEIGPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWNKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 7.862e-36 Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + ++++TLN A+ K L VAAQNC+ GAFTGE+S M+ +L WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKNNLGELINTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVANGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.027e-35 Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + ++++TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+ALS GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 3 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 164
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 1.341e-35 Identity = 76/164 (46.34%), Postives = 103/164 (62.80%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + ++++TLN A+ K L + VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDAKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 165 The following BLAST results are available for this feature:
BLAST of CX292440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292440 ID=CX292440; Name=CX292440; organism=Citrus clementina; type=EST; length=548bpback to top |