CX292440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPISB_DANRE (Triosephosphate isomerase B OS=Danio rerio GN=tpi1b PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.751e-35 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 RKFFVGGNWK NG + ++++ +TLN A+ +S L + VAAQNC+ GAFTGE+S M+ + + WVILGHSERR + ES++ +G KVA+AL GL VIAC+GE L++RE+G T VV QTK IA+ + +W VVLAY Sbjct: 4 RKFFVGGNWKMNGDKKSIEELANTLNSAKLNPDTEVVCGAPTIYLDYA--RSKLDPNIDVAAQNCYKVAKGAFTGEISPAMIKDCGVKWVILGHSERRHVFGESDELIGQKVAHALENGLGVIACIGEKLDEREAGITEKVVFAQTKFIADNVKDWSKVVLAY 164
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.287e-35 Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + ++++TLN + K L + F V+AQNC+ GAFTGE+S M+ + WVILGHSERR + ES++ +G KVA+ALS + VI C+GE L+QRE+G T VV EQTKAIA+ + +W VVLAY Sbjct: 3 SRKFFVGGNWKMNGDKKSLTELINTLNSGKISADTEVVCGAPTIYLDFARQK--LDAKFAVSAQNCYKVAKGAFTGEISPAMIKDCGATWVILGHSERRHVFGESDELIGQKVAHALSENVGVIGCIGEKLDQREAGITEKVVFEQTKAIADNVKDWSKVVLAY 164
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.287e-35 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.287e-35 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_MACMU (Triosephosphate isomerase OS=Macaca mulatta GN=TPI1 PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.287e-35 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_MACFA (Triosephosphate isomerase OS=Macaca fascicularis GN=TPI1 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 2.287e-35 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.287e-35 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL+ GL VIAC+GE L++RE+G T VV EQTK IA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_RAT (Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 3.902e-35 Identity = 78/164 (47.56%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ +L WV+LGHSERR + ES++ +G KV +ALS GL VIAC+GE L++RE+G T VV EQTKAIA+ + +W VVLAY Sbjct: 4 SRKFFVGGNWKMNGRKKCLGELICTLNAAKLPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHIFGESDELIGQKVNHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWCKVVLAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPISA_DANRE (Triosephosphate isomerase A OS=Danio rerio GN=tpi1a PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.902e-35 Identity = 78/164 (47.56%), Postives = 100/164 (60.98%), Query Frame = 1 Query: 55 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +RKFFVGGNWK NG E + +++ TLN A +S L VAAQNC+ GAFTGE+S M+ + I WVILGHSERR + ES++ +G KVA+ L L VIAC+GE LE+RE+G+T VV EQTK IA+ + +W VVLAY Sbjct: 3 SRKFFVGGNWKMNGDKESLGELIMTLNTASLNDETDVVCGAPSIYLDYA--RSKLDQRIGVAAQNCYKVPKGAFTGEISPAMIKDCGIDWVILGHSERRHVFGESDELIGQKVAHCLESDLGVIACIGEKLEEREAGTTEDVVFEQTKVIADNVKDWTRVVLAY 164
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_ORYLA (Triosephosphate isomerase OS=Oryzias latipes GN=tpi1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.655e-35 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 R+FFVGGNWK NG E +++++STLN A +S L S VAAQNC+ GAFTGE+S M+ + WVILGHSERR + E+++ +G KVA+AL L VIAC+GE LE+RE+G+T V+ QT+ IAE + +W+ VVLAY Sbjct: 4 RRFFVGGNWKMNGNKESLEELMSTLNTASLHEDTEVVCAAPSIYLDFA--RSGLDSRISVAAQNCYKVAKGAFTGEISPAMIKDCGADWVILGHSERRHVFGENDELIGQKVAHALESDLSVIACIGEKLEEREAGTTEDVIFAQTQVIAENVMDWEKVVLAY 164 The following BLAST results are available for this feature:
BLAST of CX292440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292440 ID=CX292440; Name=CX292440; organism=Citrus clementina; type=EST; length=548bpback to top |