CX292440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB8 (Triosephosphate isomerase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20 Identity = 61/165 (36.97%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAY 546 RK + GNWK N T +E K+V L K++ S+ VAAQN + GAFTGEV+ ML + I +V+LGHSERR NE+++ + KV A + I C GE+LEQRE+G+T V+ Q KA ++N + +V+AY Sbjct: 2 RKAIIAGNWKMNKTIDEAVKMVEELKPL-VKDATCDVVVCPTFVCLDAVKKAVAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIDYVVLGHSERREYFNETDEALNKKVKKAFEHNITPILCCGESLEQRENGTTNKVIEAQIKADIAGLTNEQVEKLVIAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.591e-20 Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 52 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAY 546 M R V GNWK NG K +++ + +A +S + + +QN ++ GAFTGEVSA ML + +VI+GHSERRAL E++ + K A+A + GL I CVGETLE+R+SG+T +V Q +A+ + ++ + N ++AY Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAY 163
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_PELPB (Triosephosphate isomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.079e-20 Identity = 60/164 (36.59%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGT-SEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 R+ V GNWK N + +E V+ L K + S+ + AQNC GAFTGEVSA M++ + VI+GHSERR E+N V ++ ALS GL VI CVGETL +RESG V++ Q + + I + +V+AY Sbjct: 2 RRKIVVGNWKMNNSVAESVQLATDVLAALGEGFSGCEVGIAPTYLALDATEKVIAESEVQLVAQNCHYENDGAFTGEVSARMILAVGCSSVIIGHSERRQYFGETNATVNLRIKKALSEGLNVILCVGETLAERESGVMETVISSQVREGLDGIIDISAIVIAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPU (Triosephosphate isomerase OS=Mycoplasma pulmonis GN=tpiA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.079e-20 Identity = 58/169 (34.32%), Postives = 90/169 (53.25%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVST------LNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAY 546 +K + GNWK N T +E + ++ LN A+ + L +++ ++ AQN + GAFTGE+SA+ML +++ +VI+GHSERR E+N V K A+ GL I CVGE+LE+ E+G T AV+ +Q K E + + +V+AY Sbjct: 2 KKLLIIGNWKMNKTYDEARDFINAFSNAYALNGAKISENIEYGIAPSFTNMSLFNKELLEKTNINLVAQNINENRSGAFTGEISAQMLKSINAKYVIVGHSERRQNYRETNKIVNQKAKAAIENGLIPIICVGESLEEYEAGKTKAVIKKQIKQSLEAL-DLSKIVVAY 169
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_CARHZ (Triosephosphate isomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tpiA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.079e-20 Identity = 63/165 (38.18%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQT-KAIAEKISNW-DNVVLAY 546 RK F+ GNWK T E V L ++ ++L S+ + AQN K GAFTGEVS ML ++ + +VILGHSERRA E+++ + K+ A + GL I CVGETLE+RE G T AVV Q K +A + +N+ +AY Sbjct: 2 RKPFIAGNWKMYKTPVEAAGFVRELIDSLKDVSGVDVAVCPPFPALWPVKEALEGSNIALGAQNMHFEKEGAFTGEVSPAMLQDIGVKYVILGHSERRAYFGETDELINQKIKAAFTWGLNPIFCVGETLEERERGITKAVVEIQVLKGLAGVTAEQAENLTIAY 166
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBB (Triosephosphate isomerase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=tpiA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.715e-20 Identity = 62/165 (37.58%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAY 546 RK + GNWK N T +E K+V L K+ S+ VAAQN + GAFTGEV+ ML + I +V+LGHSERR NE+++ + KV A + + I C GETLEQRESG T +A Q K ++ + VV+AY Sbjct: 2 RKAIIAGNWKMNKTVDEAVKVVEELKPL-VKDATCDVVVCPTFVCLDAVKKATAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIEYVVLGHSERREYFNETDEAINKKVKAAFAHNITPIVCCGETLEQRESGVTNNFIACQIKVDIAGLTKEQAEKVVIAY 165
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.715e-20 Identity = 61/165 (36.97%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAI-AEKISNWDNVVLAY 546 RK V GNWK N T +E + LNEA L+ + V A+NC + GA+TGEVSAEM+ + +VILGHSERRA E+ + +KV AL+ GL I C+GE LE+RE+ VVA Q +++ + ++ ++LAY Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKASGAYTGEVSAEMVASTGAKYVILGHSERRAYYGETVAILEEKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQMESVFSLSAEDFSKIILAY 166
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_VIBSA (Triosephosphate isomerase OS=Vibrio sp. (strain ANT-300) GN=tpiA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20 Identity = 59/165 (35.76%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAY 546 R+ V GNWK N T V+ +++ L +A + AQ+C V GAFTGE SA ML + ++GHSERR + ES++ V DK A GL + C+GETLEQ E+G T AVV Q +A+ K I++ +N V+ Y Sbjct: 2 RQALVMGNWKLNATKGSVEALINGLVDAAKDNATVEVAVCPPAVFIPQVEALTADTAITYGAQDCDVNTSGAFTGENSAVMLKEFGCKYTLVGHSERRVIHGESSEVVADKFAVTPENGLVPVLCIGETLEQFEAGETKAVVEAQLQAVVTKSGITSLNNAVIGY 166
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_RHOBA (Triosephosphate isomerase OS=Rhodopirellula baltica GN=tpiA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20 Identity = 57/167 (34.13%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 52 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAY 546 M+R+ + GNWK N +E + + +A +++ + + AQN + + GAFTGEV+A ML ++ +VILGHSERR L+ E++ V K+ AL+ L I CVGETLEQRE+ T +V+ Q + E + + N+V+AY Sbjct: 1 MSRRILIAGNWKMNMRAESGASLAKGIVDAVGKSPAVEVVLCPPSVYLSGVADAVVGTPVELGAQNLYAAEDGAFTGEVNASMLTDVGCRFVILGHSERRQLMGETDACVAKKLHAALAGNLVPIVCVGETLEQREADDTESVIETQIRGSLEGLDEARAANIVIAY 167
BLAST of CX292440 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPH (Triosephosphate isomerase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=tpiA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20 Identity = 53/152 (34.87%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 58 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK 513 R+ V GNWK NG ++V ++VS + E L V AQN + + GA+TGE+SA ML + +V++GHSERR +E +FV K + G+ + CVGETL +RE+G T V+A+Q A++ K Sbjct: 2 RQKIVAGNWKMNGQIQQVTELVSQIEELIGFDCAAQVAVMPPSIYIPKVRDCLRTGKIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPVLCVGETLSERENGKTEQVIAQQVLAVSAK 153 The following BLAST results are available for this feature:
BLAST of CX292440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292440 ID=CX292440; Name=CX292440; organism=Citrus clementina; type=EST; length=548bpback to top |