CX292443

Overview
NameCX292443
Unique NameCX292443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  222 ATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            ATN FS  N L +GGFGSV++G+LP GQ +AVK+ +  S QG  EF +EV +L+  QHRN+V L+GFC E  + +LVYE++ N SLD  ++
Sbjct:  341 ATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIF 431          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.547e-20
Identity = 48/99 (48.48%), Postives = 68/99 (68.69%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F    + +ATN FS  N L +GGFGSV++G+LP GQ +AVK+    S QG+ EF +EV +L+  QHRN+V L+GFC E  + +LVYE++ N SLD  ++
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIF 426          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.021e-20
Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 3
Query:  192 RWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYK-LASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            R FT+ EL +AT+ FS  + L  GGFG+V+RG   DG VVAVK+ K +  + G+ +F +E+E++S A HRN++ LIG+C    +RLLVY Y+ NGS+ S L  K
Sbjct:  285 RSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAK 388          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.021e-20
Identity = 45/99 (45.45%), Postives = 70/99 (70.71%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F +  +E+AT+ FS  N L +GGFG V++G+LP+   +AVK+    S QG QEF +EV +++  QH+N+V L+GFC+E  +++LVYE++ N SLD  L+
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLF 425          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.639e-20
Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F    + +AT+ FS  N L +GGFG+V++G  P+GQ VAVK+    S QGD EF +EV +L+  QH+N+V L+GFC E  + +LVYE++ N SLD  ++
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIF 434          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.639e-20
Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 3
Query:  204 YAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            Y  +  ATN+FSE N + +GGFG V++G   +G  VAVK+   +S QGD EF +EV V++  QHRN+V L+GF +  G+R+LVYEY+ N SLD  L+
Sbjct:  327 YRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLF 423          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20
Identity = 47/100 (47.00%), Postives = 71/100 (71.00%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYG 497
            F +  LE AT++FS  N L +GGFG V++G+LP+   VAVK+    S QG QEF +EV +++  QH+N+V L+GFC+E  +++LVYE++ N SL+  L+G
Sbjct:  309 FDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFG 408          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20
Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 3
Query:  192 RWFTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYGK 500
            R+F+ +EL+ AT  F  +  +  GGFG+V+ G L DG  VAVK+    S QG  EF +E+++LS  +HR++V LIG+C E+ + +LVYE++ NG    HLYGK
Sbjct:  512 RYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGK 614          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20
Identity = 45/99 (45.45%), Postives = 69/99 (69.70%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLY 494
            F++  +E AT++FS++N +  GGFG V+RG L  G  VAVK+    S QG +EF +E  ++S  QH+N+V L+GFC+E  +++LVYE++ N SLD  L+
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLF 431          
BLAST of CX292443 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20
Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 3
Query:  198 FTYAELELATNRFSEANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGKRLLVYEYICNGSLDSHLYG 497
            FT   ++ ATN ++E+  L +GG G+V++G+LPD  +VA+K+ +L  S   ++F +EV VLS   HRNVV L+G C+E    LLVYE+I NG+L  HL+G
Sbjct:  397 FTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHG 496          
The following BLAST results are available for this feature:
BLAST of CX292443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CRK37_ARATH1.185e-2051.65Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK36_ARATH1.547e-2048.48Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y2239_ARATH2.021e-2048.08Probable LRR receptor-like serine/threonine-protei... [more]
CRK31_ARATH2.021e-2045.45Putative cysteine-rich receptor-like protein kinas... [more]
CRK40_ARATH2.639e-2046.46Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK15_ARATH2.639e-2049.48Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK32_ARATH3.447e-2047.00Putative cysteine-rich receptor-like protein kinas... [more]
Y4391_ARATH4.502e-2045.63Probable receptor-like protein kinase At4g39110 OS... [more]
CRK35_ARATH4.502e-2045.45Putative cysteine-rich receptor-like protein kinas... [more]
WAK1_ARATH5.880e-2047.00Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC04015G08SK FlavFr1 Citrus clementina cDNA clone C04015G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292443 ID=CX292443; Name=CX292443; organism=Citrus clementina; type=EST; length=542bp
ATGAATTCCTGTTGGAGAAATTATCAACATTGAATCGAGAGCCTGATATC
GGAGTGCTGAATTATAAGCTTGATCTGAAAATAAGTAAAAGTGTGAGAGA
GGCAGTTTCATTATCCAGGAATAAACCTCCAGGTCCTCCTCCATTGTGTT
CAATATGTCAGCACAAGGCACCTGTATTTGGTAATCCTCCGAGGTGGTTC
ACCTATGCTGAATTGGAGCTTGCTACAAATAGATTTTCAGAAGCAAATTT
CTTGGCTGAAGGTGGATTTGGTTCTGTTCACCGAGGTGTTCTACCAGATG
GCCAGGTTGTTGCCGTCAAGCAATATAAATTGGCTAGTTCTCAAGGTGAT
CAAGAATTTTGCTCAGAAGTTGAGGTTTTAAGTTGTGCACAACATCGCAA
TGTTGTGATGTTGATTGGATTCTGTGTGGAGGATGGGAAGAGATTGCTGG
TTTATGAGTATATTTGCAATGGGTCCTTGGATTCCCATCTTTATGGTAAA
TTCAACTTTATCCTAAATGGTTTTATAATTTACACTAACGTT
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