CX292449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: CAN2_PIG (Calpain-2 catalytic subunit (Fragment) OS=Sus scrofa GN=CAPN2 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.662e-11 Identity = 34/121 (28.10%), Postives = 69/121 (57.02%), Query Frame = 2 Query: 68 NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGS 430 + FS+ T R+++ + + K+G KEF ++ +Q ++ ++ ++D DRSG ++S E+R+AL GF + + ++V RF I++DNF+ C + ++ L K+ D+ +G+ Sbjct: 193 SDGFSIETCRIMVDMLDSDGSAKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARF---ADDQLIIDFDNFVRCLVRLETLFRISKQLDSENTGT 310
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: CPNS1_HUMAN (Calpain small subunit 1 OS=Homo sapiens GN=CAPNS1 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11 Identity = 32/127 (25.20%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 77 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 F + T R ++ + K+G +EF ++++++ W+A++++ D DRSG I S+EL A + GF ++ + ++++ R+ G +++DNFI C + + + FK D +G + ++ Sbjct: 139 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGN---MDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWL 262
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: CPNS2_MOUSE (Calpain small subunit 2 OS=Mus musculus GN=Capns2 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.657e-11 Identity = 38/138 (27.54%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 17 NSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRF-DKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSG 427 N L KEL+ + FSL T R ++ + K+G +EF ++++++ W+ +F++ D D SG + S++L A+ + GF ++ + ++V R+ D+ GG ++++NFI C + + + FK D G Sbjct: 104 NKVLSKHKELK------TEGFSLDTCRSIVSVMDSDTTGKLGFEEFKYLWNNIKKWQCVFKQYDSDHSGSLGSSQLHGAMQAAGFQLNEQLYLMIVRRYADEDGG----MDFNNFISCLVRLDAMFRAFKALDRDRDG 231
BLAST of CX292449 vs. ExPASy Swiss-Prot
Match: CPNS1_RABIT (Calpain small subunit 1 OS=Oryctolagus cuniculus GN=CAPNS1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.657e-11 Identity = 33/127 (25.98%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 77 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTRFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 457 F L T R ++ + K+G +EF ++++++ W+A++++ D DRSG I S EL A + GF ++ + ++++ R+ G +++DNFI C + + + FK D +G + ++ Sbjct: 137 FGLDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGTICSRELPGAFEAAGFHLNEHLYNMIIRRYSDEAGN---MDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWL 260 The following BLAST results are available for this feature:
BLAST of CX292449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292449 ID=CX292449; Name=CX292449; organism=Citrus clementina; type=EST; length=461bpback to top |