CX292466

Overview
NameCX292466
Unique NameCX292466
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP237_ARATH (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17
Identity = 47/158 (29.75%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFDQ*AR 713
            + G V   + +E+  +   +    I  D+ T   ++ AC    AL    + H +       +  S  N ++ MY++C  +D A  VF  M +RD+ SW+TM+ GF  +GLG++A+ +F+  ++ G+ PD+   + + SACS  G V EG   F+  +R
Sbjct:  381 ITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538          

HSP 2 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 33/120 (27.50%), Postives = 63/120 (52.50%), Query Frame = 3
Query:  330 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFVGVFSACSALGDVVEG 686
            T+  +++AC   +A+++ K +H HV        +     ++  Y++C  ++ A  VF  M +RD+ +W+ MI+GF+ +    D + +F   ++  GL P+    VG+F A    G + EG
Sbjct:  105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP232_ARATH (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17
Identity = 51/166 (30.72%), Postives = 85/166 (51.20%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK--PDDQIFVGVFSACSALGDVVEG-MLHFDQ*ARLWHCP 728
            + G V  G +K ++ +   + +Q I  +  TFS  ++ACG   ALE+   +H    ++   + V   N ++ MYS+C  +++A  VF  + +R L SW+ MI GF   G G  A+D F   ++A +K  PD+     +  ACS+ G +  G  +H       +HCP
Sbjct:   79 MSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244          

HSP 2 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 3
Query:  246 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 686
            G  +EG+  EA+ +   L++    +D    S ++    D   L + K +     +L S L  S  N ++ MY +C  +D+A   F+ M  +D+ SW  +ITG+ K+GLG+ +V IF +  +  ++PD+  ++ V SACS  G + EG
Sbjct:  287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17
Identity = 57/202 (28.22%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  126 SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFDQ*ARLWH 722
            +G I+ G +  A ++ +   H DD + ++           + G+   G   E+      L++  +S +  + + ++ AC  + + E  K +H  VE+      VS  N ++ MYS C ++  A  VF  M E R + SW +MI G A +G GE+AV +F++    G+ PD   F+ +  ACS  G + EG  +F +  R++H
Sbjct:  211 AGYIKAGELESAKRIFSEMPHRDDVSWST----------MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYH 402          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  201 ASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFVGVFSACSALGDVVEG 686
            +S SS  + +  QL GL   GK++EA+++L  +++  ++VD   F  L++ C   +A EE   V+      +S L V   N  L M+    ++ DA+ VF  M+ER+L SW+ ++ G+AK G  ++A+ ++ +     G+KPD   F  V   C  + D+  G
Sbjct:   53 SSSSSSTHFSNSQLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215          

HSP 2 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 45/144 (31.25%), Postives = 72/144 (50.00%), Query Frame = 3
Query:  246 GLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGD 674
            G  K+G   EA+ +   +L    +  D+ TF  +++ CG    L   K VH HV R    L +   N ++ MY +C  +  A  +F  M  RD+ SW+ MI+G+ +NG+  + +++F   +   + PD      V SAC  LGD
Sbjct:  169 GYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312          

HSP 3 Score: 81.2629 bits (199), Expect = 6.004e-15
Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGM 689
            + G  + G   E +E+   +    +  DL T + ++ AC         + +H +V      + +S  N + +MY    S  +A  +FS M  +D+ SW TMI+G+  N L + A+D +    Q  +KPD+     V SAC+ LGD+  G+
Sbjct:  269 ISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418          

HSP 4 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 40/134 (29.85%), Postives = 72/134 (53.73%), Query Frame = 3
Query:  303 KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFDQ 704
            K  +  +  T +  + AC    AL   K +H HV R    L     N +L MY  C  M+ A+S F N  ++D+TSW+ ++TG+++ G G   V++F +  ++ ++PD+  F+ +   CS    V +G+++F +
Sbjct:  491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK 623          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 47/154 (30.52%), Postives = 84/154 (54.55%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFVGVFSACSALGDVVEGMLHF 698
            ++G  + GK +EA+ +   +  + I  D  T   L+ AC    AL   K VH ++ ++     + + N +L +Y+ C  +++A ++F  M +++  SW ++I G A NG G++A+++F   +   GL P +  FVG+  ACS  G V EG  +F
Sbjct:  194 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYF 347          

HSP 2 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 41/136 (30.15%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  279 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 686
            + V GL+E      D  T+  L++A      +   + +H  V R      +   N +L +Y+ C  +  A+ VF  M E+DL +W+++I GFA+NG  E+A+ ++++    G+KPD    V + SAC+ +G +  G
Sbjct:  111 MRVSGLVEP-----DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 46/154 (29.87%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFD 701
            + G    G   EA++    ++   I  D  +   ++ +C    +LE  K +H + ER     +    N +++MYS+C  +  A  +F  M  +D+ SW TMI+G+A +G    A++ F++ ++A +KP+   F+G+ SACS +G   EG+ +FD
Sbjct:  213 ISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 366          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFDQ*AR 713
            + G  K  +  EA ++   + ++ I  +  T + ++ +C    +L   K+VH ++ R    +    +   + MY+ C ++  A +VF  M ER++ SW +MI  F  NGL E+A+D F + K   + P+   FV + SACS  G+V EG   F+   R
Sbjct:  284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441          

HSP 2 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 44/151 (29.14%), Postives = 75/151 (49.67%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 686
            + G +K  K  E   +  L+    +++D  T   L++ACG+  A +  K VH  V    S +  S Y    I+ MY +C  +D+A  +F    +R++  W T+I+GFAK     +A D+F Q  +  + P+      +  +CS+LG +  G
Sbjct:  182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHG-VSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG 331          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 49/156 (31.41%), Postives = 84/156 (53.85%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ-AGLKPDDQIFVGVFSACSALGDVVEGMLHFD 701
            +DG  + G   +A+ +   LL +     D  T    + AC    ALE  + +H  V+     L V    G++ MYS+C S+++A  VF++   +D+ +W+ MI G+A +G  +DA+ +F++ +   GL+P D  F+G   AC+  G V EG+  F+
Sbjct:  230 IDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 45/148 (30.41%), Postives = 83/148 (56.08%), Query Frame = 3
Query:  246 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFVGVFSACSALGDVVEG 686
            G  +EG   EA+++   +E++ IS D+ T + ++  C   + L+E K VHE ++       +   N ++ MY++C SM +A  VFS M  +D+ SW+T+I G++KN    +A+ +F+   ++    PD++    V  AC++L    +G
Sbjct:  371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518          

HSP 2 Score: 87.0409 bits (214), Expect = 1.094e-16
Identity = 49/157 (31.21%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLL-EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFD 701
            + G  K     EA+ +  LL E++  S D  T + ++ AC    A ++ + +H ++ R    S   V+  N ++ MY++C ++  A  +F ++  +DL SW  MI G+  +G G++A+ +F+Q +QAG++ D+  FV +  ACS  G V EG   F+
Sbjct:  470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624          

HSP 3 Score: 82.4185 bits (202), Expect = 2.695e-15
Identity = 42/149 (28.19%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 686
            ++G V  G  ++ + V   +    I +DL T   +   C D++ +   +AVH    +          N +L MYS+C  +D A +VF  M++R + S+ +MI G+A+ GL  +AV +F + ++ G+ PD      V + C+    + EG
Sbjct:  268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416          

HSP 4 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 38/141 (26.95%), Postives = 71/141 (50.35%), Query Frame = 3
Query:  240 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACS 662
            ++ L K G    +I +   +    + +D  TFS + ++    +++   + +H  + +     R S  N ++  Y +   +D A  VF  MTERD+ SW+++I G+  NGL E  + +F Q   +G++ D    V VF+ C+
Sbjct:  167 MNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307          
BLAST of CX292466 vs. ExPASy Swiss-Prot
Match: PP184_ARATH (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana GN=PCMP-E23 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 3
Query:  255 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFDQ 704
            + GK  EA ++   +EK  +S D  T S ++ ACG   ALE  K +  H   L     +    G++ MY +C  +++A  VF  M  ++  +W+ MIT +A  G  ++A+ +F +     + P D  F+GV SAC   G V +G  +F +
Sbjct:  311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHE 457          

HSP 2 Score: 82.4185 bits (202), Expect = 2.695e-15
Identity = 37/121 (30.58%), Postives = 72/121 (59.50%), Query Frame = 3
Query:  330 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGML 692
            T++ +  AC   + +   ++VH  + ++     V   + ++ MY++C  +  A  +F  +TERD  SW++MI+G+++ G  +DA+D+F + ++ G +PD++  V +  ACS LGD+  G L
Sbjct:  134 TYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRL 254          

HSP 3 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 43/164 (26.22%), Postives = 81/164 (49.39%), Query Frame = 3
Query:  186 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALG 671
            D+  E    S N+     + G  + G  K+A+++   +E++    D  T   ++ AC     L   + + E    +   + +ST+ G  ++ MY +C  +D A  VF+ M ++D  +W  MIT +++NG   +A  +F + ++ G+ PD      V SAC ++G
Sbjct:  191 DEITERDTVSWNS----MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA--ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348          
The following BLAST results are available for this feature:
BLAST of CX292466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
PP237_ARATH2.879e-1729.75Pentatricopeptide repeat-containing protein At3g16... [more]
PP232_ARATH2.879e-1730.72Putative pentatricopeptide repeat-containing prote... [more]
PP122_ARATH2.879e-1728.22Pentatricopeptide repeat-containing protein At1g74... [more]
PPR45_ARATH3.761e-1731.29Pentatricopeptide repeat-containing protein At1g15... [more]
PP330_ARATH3.761e-1730.52Pentatricopeptide repeat-containing protein At4g21... [more]
PP165_ARATH3.761e-1729.87Pentatricopeptide repeat-containing protein At2g20... [more]
PPR14_ARATH6.415e-1729.75Pentatricopeptide repeat-containing protein At1g06... [more]
PP354_ARATH6.415e-1731.41Pentatricopeptide repeat-containing protein At4g37... [more]
PP320_ARATH6.415e-1730.41Pentatricopeptide repeat-containing protein At4g18... [more]
PP184_ARATH6.415e-1731.33Pentatricopeptide repeat-containing protein At2g34... [more]

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Properties
Property NameValue
Genbank descriptionC04016A10SK FlavFr1 Citrus clementina cDNA clone C04016A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292466 ID=CX292466; Name=CX292466; organism=Citrus clementina; type=EST; length=730bp
ATTTTGGAATTCATCAGAACAGCCCAAGTTTCTATCAGCAGGACCAAAAT
GGTGGACAGTATCAGTGGGACCAAAGTCGTAGGCAGTATCAGCAGAATCC
TAATGAAGGACAATACCAGTCCTACTCAGGGAATATTCAAAATGGGATGA
TGGCATCTCAAGTATTAAATAATTGTAAACATGAAGATGACTTTGCTGAG
GCCTCTAGGAGTAGCCAAAATAATGGAACCCTTGAGCAGCTGGATGGTTT
GGTTAAGGAGGGGAAAGTGAAGGAAGCTATAGAAGTTTTGGGGTTGTTAG
AGAAGCAGTGCATTTCTGTGGATTTACCCACATTTTCACAGTTAATGCAG
GCATGTGGGGATGCAAAAGCACTAGAAGAAGCAAAAGCTGTGCATGAACA
TGTTGAACGATTGCTGTCCCCTCTCAGAGTTAGCACTTATAACGGGATTT
TAAAAATGTATTCAGAATGTGACTCTATGGATGATGCGTTCAGTGTGTTT
AGTAATATGACAGAGCGTGATTTGACTTCTTGGGACACTATGATAACTGG
GTTCGCCAAGAATGGTCTTGGAGAGGATGCAGTTGATATTTTCTCTCAGT
TCAAGCAAGCTGGACTGAAACCAGATGATCAAATTTTTGTTGGTGTTTTC
TCTGCATGTAGTGCTTTGGGTGATGTTGTTGAGGGAATGCTGCACTTTGA
TCAATGAGCAAGACTATGGCATTGTCCCAT
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