CX292473

Overview
NameCX292473
Unique NameCX292473
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_ENT38 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sp. (strain 638) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 82/231 (35.50%), Postives = 129/231 (55.84%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++T E   AEL GKG   ++AS  GR Y  MDR +N WD V++ +D   + +   +F +AV  ++    + + ND+++   VI  E G+A   + DGDA++  NFRADR   + +A    DFD F R +   + +  + +Y  ++K+P  Y   P+ +  T GE++  +       SET K
Sbjct:  116 MGLLSAGGVHSHEDHILAMVEMAAERGAEKIYLHAFLDGRDTPPRSAKSSLQTFEDKFAEL-GKG---RVASIIGR-YYAMDR-DNRWDRVEQAYDLMTMAKGEFQFDTAVAGLEAAYAR-DENDEFVKATVIRAE-GQADAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNLNFIMLTEYAADIKVPCAY--PPASLANTLGEWMAKHDKTQLRISETEK 336          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB9 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS195) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27
Identity = 84/232 (36.21%), Postives = 126/232 (54.31%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSE-IDRTSGEYLVHNGVRTFACSETVK 694
            +GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+   +   + DL    G G   +IAS  GR Y  MDR +N WD V + +D    G++  ++ +AV A++   E+ N ND+++    I D +G+ V  + DGDA++  NFRADR   + ++    DFD F+R   PK+ +  + +Y G++K P  Y   PSE +  T GE L   G      SET K
Sbjct:  116 MGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKSSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR-DNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYER-NENDEFVSSSAITDADGQ-VATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAGDIKAPIAY---PSENLVNTLGEVLQKQGRTQLRISETEK 336          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 84/232 (36.21%), Postives = 126/232 (54.31%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSE-IDRTSGEYLVHNGVRTFACSETVK 694
            +GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+   +   + DL    G G   +IAS  GR Y  MDR +N WD V + +D    G++  ++ +AV A++   E+ N ND+++    I D +G+ V  + DGDA++  NFRADR   + ++    DFD F+R   PK+ +  + +Y G++K P  Y   PSE +  T GE L   G      SET K
Sbjct:  116 MGLLSAGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKSSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR-DNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYER-NENDEFVSSSAITDADGQ-VATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAGDIKAPIAY---PSENLVNTLGEVLQKQGRTQLRISETEK 336          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_CLOAB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium acetobutylicum GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 87/231 (37.66%), Postives = 127/231 (54.98%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GLLS GGVHS  + L+ LL+ A ++  K++ +H   DGRDV   S+  F++ IE  + E+ G G   +IA+  GR Y  MDR +N W+  +  ++A VLG+   + +SA++AV       N  D+++ P VIV E GK V  I D D+V+ FNFR DR   + +A+  E FD F R R   I +  M +YD   K        P  I  T GEY+ + G+     +ET K
Sbjct:  114 MGLLSPGGVHSHTNHLKGLLQLAKKKNVKKVFVHAFLDGRDVPPSSAKEFIKDIEDYMNEI-GLG---EIATVSGR-YYAMDR-DNRWEREELAYNAMVLGKG-EEAESAIKAV-DASYHDNKTDEFVLPTVIVKE-GKPVATIKDKDSVIFFNFRPDRARQITRAIAEEAFDGFKRDRL-NIEFVTMTEYDASFK-GVDVAFGPENITNTLGEYVSNKGLNQLRIAETEK 333          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_AKKM8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.837e-27
Identity = 82/231 (35.50%), Postives = 119/231 (51.52%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GL+SDGGVHS ++ L  ++K A E G + I +H +TDGRD    S VGF+  +E+ +     +   A+IA+  GR Y  MDR +  WD  K  WDA VLG       S  E V++   +    D++L P +    N + V    D D V  FNFRADR   ++ A  Y +FD FDR   PK+ Y  + +YD   K PS  +    +++   G+ +   G      +ET K
Sbjct:  119 LGLVSDGGVHSHINHLIGIVKYAYEAGVRDICIHAITDGRDCSPTSGVGFIRQLEEAV-----RPYGAKIATVVGRFY-AMDR-DKRWDRNKLAWDAIVLGRGEQCSCSPAEYVEQCYAK-GETDEFLKPGIFAYGNEQRVR---DNDVVFFFNFRADRARQMSDAFLYPEFDGFDREVTPKVHYVTLTEYDA--KYPSPIVFEQEQLNNIFGQIVSEAGKTQLRIAETEK 336          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS185) GN=gpmI PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 84/232 (36.21%), Postives = 126/232 (54.31%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSE-IDRTSGEYLVHNGVRTFACSETVK 694
            +GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+   +   + DL    G G   +IAS  GR Y  MDR +N WD V + +D    G++  ++ +AV A++   E+ N ND+++    I D +G+ V  + DGDA++  NFRADR   + ++    DFD F+R   PK+ +  + +Y G++K P  Y   PSE +  T GE L   G      SET K
Sbjct:  116 MGLLSAGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKTSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR-DNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYER-NENDEFVSSSAITDADGQ-VATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAGDIKAPIAY---PSENLVNTLGEVLQKQGRTQLRISETEK 336          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_BACME (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus megaterium GN=gpmI PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 82/231 (35.50%), Postives = 124/231 (53.68%), Query Frame = 2
Query:    5 GLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            GLLSDGGVHS ++ L  LL+ A   G +++ +H   DGRDV   S+  +++ + + + E    GV  +IA+  GR Y +MDR +  W+ V++ + A V GE P  + SA E VK   +     D+++ P VI  E+G  V  I D DAV+ +NFR DR + ++     EDF  FDR  + PK  +   L +  E  +  +    P  +D T GE L  N ++    +ET K
Sbjct:  115 GLLSDGGVHSHIEHLYALLRLAKSEGLEKVYIHGFLDGRDVAPQSAETYLKELNEKIEEY---GV-GEIATLSGRYY-SMDR-DKRWERVEKSYRAMVYGEGP-SYTSAEECVKDSYDN-GIYDEFVLPSVITKEDGSPVATIQDEDAVIFYNFRPDRAIQISNTFANEDFRSFDRGEKHPKHLHFVCLTHFSE-TVDGYVAFKPINLDNTLGEVLSQNNLKQLRIAETEK 336          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_CLOBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27
Identity = 86/231 (37.23%), Postives = 130/231 (56.28%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GLLS GGVHS +D L+ L+K A E+  K++ +H   DGRDV   S+  ++E IE  + E+   GV  +IA+  GR Y  MDR +  W+ V+  ++A VLG+   +  SAVE ++K   + N  D+++ P V++ E GK    I + D+VV FNFR DR   L +A+  + FD F+R     + Y  M +YD  L+        P  ++ T GEY+  NG +    +ET K
Sbjct:  114 LGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIEIYMQEI---GV-GEIATISGR-YYAMDR-DKRWERVQLCYNAIVLGKG-EEANSAVEGLEK-SYRDNKTDEFVLPSVVLKE-GKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETL-DLTYVTMTEYDSTLE-NVEVAFPPEHLNNTLGEYVSKNGKKQLRIAETEK 333          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas fluorescens (strain Pf0-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.547e-27
Identity = 83/231 (35.93%), Postives = 124/231 (53.68%), Query Frame = 2
Query:    2 IGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            +GLLSDGGVHS  D L  + + A +RGA++I LH   DGRD    S+   +E ++     L GKG   +IAS  GR Y  MDR +N WD V + ++  V G+      +A E ++    +  +++     FV     G+ V  + DGDAVV  NFRADR   L++    + F +F+R R PK++Y G+ QY   +  P+ +  +P  ++   G+YL  NG      +ET K
Sbjct:  116 MGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAASSIELLDATFQAL-GKG---RIASLIGRYYA-MDR-DNRWDRVAQAYNLIVDGKGEINAATAQEGLEAAYARGESDE-----FVKATSIGEPV-KVEDGDAVVFMNFRADRARELSRVFVEDGFKEFERARQPKVQYVGLTQYAESIPAPAAF--APGSLENVLGDYLAKNGKTQLRIAETEK 332          
BLAST of CX292473 vs. ExPASy Swiss-Prot
Match: GPMI_BACP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus pumilus (strain SAFR-032) GN=gpmI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.547e-27
Identity = 79/231 (34.20%), Postives = 124/231 (53.68%), Query Frame = 2
Query:    5 GLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPSEIDRTSGEYLVHNGVRTFACSETVK 694
            GLLSDGGVHS +  L  LLK A + G  ++ +H   DGRDV   ++  +++ +E+ + E+   GV  ++A+  GR Y +MDR +  WD V++ + A   GE P  +++  + V    E     D+++ P VI  ENG+ V  + DGD+V+ +NFR DR + ++     EDF  FDR    PK  +     +  E  +  +    P  +D T GE L  NG++    +ET K
Sbjct:  115 GLLSDGGVHSHIQHLFALLKLAKKEGLTKVYIHGFLDGRDVGQKTAKVYLKQLEEQIKEI---GV-GEVATLSGRYY-SMDR-DKRWDRVEKAYRAMAYGEGP-SYQNIYDVVDDSYEN-GIYDEFVIPSVITRENGEPVAKVNDGDSVIFYNFRPDRAIQISNTFTNEDFRSFDRGEAHPKNLHFVCFTHFSE-TVDGYVAFKPVNLDNTVGEVLAQNGLKQLRIAETEK 336          
The following BLAST results are available for this feature:
BLAST of CX292473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_ENT385.919e-2835.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB92.249e-2736.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB52.938e-2736.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOAB2.938e-2737.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AKKM83.837e-2735.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB85.011e-2736.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACME5.011e-2735.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOBL6.545e-2737.232,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEPF8.547e-2735.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACP28.547e-2734.202,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC04016B05SK FlavFr1 Citrus clementina cDNA clone C04016B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292473 ID=CX292473; Name=CX292473; organism=Citrus clementina; type=EST; length=707bp
TATTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTC
AGTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTT
CATATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATT
CGTAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTG
ACGCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGT
TATGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCT
TGGAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAAC
TAAGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTTGTCATT
GTTGATGAAAATGGAAAGGCTGTGGGTCCAATAGTAGATGGTGATGCAGT
TGTAACTTTCAACTTCCGAGCTGATCGAATGGTTATGCTTGCTAAGGCCC
TTGAATATGAAGATTTTGACAAATTTGATCGAGTTCGGTTCCCTAAAATC
CGTTATGCTGGAATGCTTCAATATGATGGGGAGTTGAAACTTCCCAGTCA
TTACCTTGTGTCTCCCTCAGAGATAGACAGAACATCTGGTGAATATTTAG
TGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAGACTGTCAAGTTGGAC
ATGTCAC
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