CX292477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP355_ARATH (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana GN=PCMP-E45 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 44/150 (29.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFVGVFSACSALGDVVEG 668 + G + G KEA++ ++ + +L T+ ++ + G L K +H + + S + + T N ++ MY +C+ + DA VF + ++D SW++MI+G ++A+D+FS + +G+KPD I V SAC++LG V G Sbjct: 179 ITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325 HSP 2 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 42/156 (26.92%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHF 680 + GLV + KEAI++ L++ I D + ++ AC A++ + VHE++ L + ++ T+ G I+ MY++C ++ A +F+ + +++ +W+ ++ G A +G G +++ F + + G KP+ F+ +AC G V EG +F Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYI--LTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYF 430
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP255_ARATH (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 54/185 (29.19%), Postives = 93/185 (50.27%), Query Frame = 3 Query: 105 YSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ---LDGLVKEGKVKEAIEVLGLLE-KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACS 644 Y N+ G + C+ +D EA + ++ + G V+ +K A +LGL+E K +++D TF+ L+ D K VH V +L ++ N ++ Y++C S+ DA VF + +DL SW++MI GF+K+ L E A ++F Q ++ ++ D + G+ SACS Sbjct: 132 YECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316 HSP 2 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 46/149 (30.87%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 228 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE--CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 668 G K + A E+ +++ + D+ T++ L+ AC + K++H V + S N ++ MY + +M+DA S+F ++ +DL SW+++ITGFA+ GL EDAV FS + + +K DD F + +CS L + G Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427 HSP 3 Score: 80.4925 bits (197), Expect = 9.240e-15 Identity = 42/151 (27.81%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT-SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGM 671 + G ++G ++A++ L I VD FS L+++C D L+ + +H + + ++ MYS+C ++ A F ++ + T +W+ MI G+A++GLG+ ++D+FSQ +K D F + +ACS G + EG+ Sbjct: 380 ITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170 OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 49/155 (31.61%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHF 680 + GL G+ EA+E+ +++ + D T + +CG L A +H+ V + + + + N ++ MY +C MD A +F M +R++ SW +MI G+A NG +A++ F Q ++ G++P+ FVGV SAC G V EG +F Sbjct: 190 IGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYF 344
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 43/153 (28.10%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHF 680 +DG ++ G E++E+ ++ + D T ++ AC +LE + + ++++ V N ++ MY +C + A VF +M +RD +W M+ G A NG G++A+ +F Q + ++PDD ++GV SAC+ G V + F Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 41/142 (28.87%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 228 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALG 653 G G+ +EAI++ + + + D Q++ AC L+ + + +++E + ++ +Y++C M+ A SVF +M E+D+ +W TMI G+A N ++ +++F Q Q LKPD VG S+C++LG Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327 HSP 2 Score: 70.8626 bits (172), Expect = 7.321e-12 Identity = 37/149 (24.83%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 668 ++G V E +++ + K + + TF +++AC A + + +H V + V+ +L +YS ++DA +F + +R + +W + +G+ +G +A+D+F + + G+KPD V V SAC +GD+ G Sbjct: 83 INGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231 HSP 3 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 38/155 (24.52%), Postives = 73/155 (47.10%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFES 686 + G KE IE+ + ++ + D + + +C AL+ + ++R + N ++ MY++C +M F VF M E+D+ + I+G AKNG + + +F Q ++ G+ PD F+G+ C G + +G+ F + Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNA 439
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 42/153 (27.45%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHF 680 + G K G +EAI++ + + + D + + + AC +LE+A++++E+V R V + ++ M+++C S++ A VF +RD+ W MI G+ +G +A+ ++ ++ G+ P+D F+G+ AC+ G V EG F Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447 HSP 2 Score: 79.7221 bits (195), Expect = 1.576e-14 Identity = 44/149 (29.53%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 228 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 668 G + ++A+ + ++ +S D TF L++AC L+ + VH V RL V NG++ +Y++C + A +VF + ER + SW +++ +A+NG +A++IFSQ ++ +KPD V V +A + L D+ +G Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241 HSP 3 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 35/149 (23.49%), Postives = 72/149 (48.32%), Query Frame = 3 Query: 237 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFE 683 + G+ EA+E+ + K + D ++ A + L++ +++H V ++ + + MY++C + A +F M +L W+ MI+G+AKNG +A+D+F + ++PD SAC+ +G + + +E Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 228 GLVKEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHFE 683 G V+ EA+E+ +EK+ + D T ++ A L +A +H ++ L ++ MYS+C S+ A VF + + + W+ MI G A +GLGE A D+ Q ++ LKPDD FVGV +ACS G V EG+L FE Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 46/150 (30.67%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 237 KEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALG--DVVEGMLH 677 + GK EA+ V L+ Q + ++ T + AC ALE + +H ++++ + + ++ MYS+C ++ + VF+++ +RD+ W MI G A +G G +AVD+F + ++A +KP+ F VF ACS G D E + H Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490 HSP 2 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 36/129 (27.91%), Postives = 66/129 (51.16%), Query Frame = 3 Query: 282 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEG 668 E QC + TF L++A + +L +++H + V N ++ Y C +D A VF+ + E+D+ SW++MI GF + G + A+++F + + +K VGV SAC+ + ++ G Sbjct: 124 ESQCYP-NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 46/153 (30.07%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 222 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHF 680 L G + G+ ++AIE+ +E++ DL F +++AC A+ K +H R V + ++ +Y + +D A V+S M+ R++ +W+ M++ A+NG GE+AV F+ + G+KPD F+ + +AC G V EG +F Sbjct: 338 LGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYF 486
BLAST of CX292477 vs. ExPASy Swiss-Prot
Match: PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 44/143 (30.77%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 255 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFVGVFSACSALGDVVEGMLHF 680 EA+ + E Q + TF+ L+ AC + AL + +H + R V N ++ MY++C ++ D+ VF + +R +L SW +M+ G+ +G G +AV++F + +G++PD +F+ V SAC G V +G+ +F Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF 438 The following BLAST results are available for this feature:
BLAST of CX292477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292477 ID=CX292477; Name=CX292477; organism=Citrus clementina; type=EST; length=687bpback to top |