CX292480

Overview
NameCX292480
Unique NameCX292480
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length747
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: Y8013_DICDI (Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 62/218 (28.44%), Postives = 99/218 (45.41%), Query Frame = 3
Query:  171 KKDRVEMATSNSNGGGDDRPTLLH-----GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLR---------------------EDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKADGSVHTTCGTPAY 746
            KK+R   ++SNS+       +  +     G+Y LG+ LG G +  V L  ++ T + +A                + KREI ++K + H  I +L  V+     ++  MD  +GG+LF+ + K  L+                     ED  +  F Q+   +  CH   + HRD+K +N+L D   N+K+ DFGLS +S   K      + CGTPAY
Sbjct:  511 KKNRSSNSSSNSSHSNAPHESSYYQPEMIGEYTLGKTLGRGNYGVVKLGTHINTKEEIAIKILYKEQMTESEFT-RCKREIEILKQLYHPFINKLLNVLEKDDAMFILMDYCQGGDLFHYVNKFGLKGVKMVNSPDIGDQVLMGVPLPEDDTKRIFTQICLGIAHCHKLNIAHRDIKHKNILFDNQMNVKIIDFGLSNWSYQEKM-----SFCGTPAY 722          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: PRKX_MOUSE (Serine/threonine-protein kinase PRKX OS=Mus musculus GN=Prkx PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  267 LGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQ-IKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIA-KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKADGSVHTTCGTPAY 746
            +G GTF +V L +  +TG+                  EQ ++ E +V+K + H  +++L         +Y  M+ V GGELF  +  +GR     +  Y  +++ A+++ HS+ + +RDLKPEN+LLD +G++K+TDFG +      K      T CGTP Y
Sbjct:   52 VGTGTFGRVNLVKE-KTGRQYCALKIMSIPDVIRLKQEQHVQNEKAVLKEINHPFLIKLLWTGHDNRFLYMLMEFVPGGELFTYLRNRGRFSSVASVFYATEIVCAIEYLHSKEIVYRDLKPENILLDREGHIKLTDFGFAK-----KLVDRTWTLCGTPEY 207          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: PLK2_RAT (Serine/threonine-protein kinase PLK2 OS=Rattus norvegicus GN=Plk2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 54/168 (32.14%), Postives = 84/168 (50.00%), Query Frame = 3
Query:  246 KYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKI-AKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKADGSVHTTCGTPAY 746
            +Y  G++LG G FAK Y   +L   K  A               E+I +EI + +++ HKH+V+ +     K  IY  ++      + + + A+  L E   R Y +Q++S + + H + + HRDLK  N  ++E   LKV DFGL+A  E L  +    T CGTP Y
Sbjct:   78 RYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPL--EHRRRTICGTPNY 243          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: PLK2_PONAB (Serine/threonine-protein kinase PLK2 OS=Pongo abelii GN=PLK2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 54/168 (32.14%), Postives = 84/168 (50.00%), Query Frame = 3
Query:  246 KYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKI-AKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKADGSVHTTCGTPAY 746
            +Y  G++LG G FAK Y   +L   K  A               E+I +EI + +++ HKH+V+ +     K  IY  ++      + + + A+  L E   R Y +Q++S + + H + + HRDLK  N  ++E   LKV DFGL+A  E L  +    T CGTP Y
Sbjct:   81 RYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPL--EHRRRTICGTPNY 246          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: PLK2_HUMAN (Serine/threonine-protein kinase PLK2 OS=Homo sapiens GN=PLK2 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 54/168 (32.14%), Postives = 84/168 (50.00%), Query Frame = 3
Query:  246 KYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKI-AKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKADGSVHTTCGTPAY 746
            +Y  G++LG G FAK Y   +L   K  A               E+I +EI + +++ HKH+V+ +     K  IY  ++      + + + A+  L E   R Y +Q++S + + H + + HRDLK  N  ++E   LKV DFGL+A  E L  +    T CGTP Y
Sbjct:   81 RYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPL--EHRRRTICGTPNY 246          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: PKH3_YEAST (Serine/threonine-protein kinase PKH3 OS=Saccharomyces cerevisiae GN=PKH3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  267 LGHGTFAKVYLARNLQT-GKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKH---IVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSA 686
            LGHG+++ V+ A + ++  K  A               + +  E + M ++  KH   I++L+     +  +YF +D   GGEL + + K G   +   R +  QLI A++F HS G+ HRDLKPEN+LLD DG L +TDFG +A
Sbjct:   17 LGHGSYSTVFKALDKKSPNKIYAIKVCSKKHIIKEAKVKYVTIEKNTMNLLAQKHHAGIIKLYYTFHDEENLYFVLDFAPGGELLSLLHKMGTFNDIWTRHFTAQLIDALEFIHSHGIIHRDLKPENVLLDRDGRLMITDFGAAA 161          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: KIN1_SCHPO (Protein kinase kin1 OS=Schizosaccharomyces pombe GN=kin1 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 55/184 (29.89%), Postives = 94/184 (51.09%), Query Frame = 3
Query:  243 GKYELGRMLGHGTFAKVYLARNLQTG----------------KSMAXXXXXXXXXXXXXXXEQIK--REISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKI-AKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKADGSVHTTCGT 737
            G Y LG+ +G G+  KV +A +L+TG                K+ A               ++I+  RE ++  +++H +I E  +V  + S  Y   + V GG++ + I + G+L+E  AR + +Q+ SA+ + H   V HRDLK EN+L+ + G++K+ DFGLS      +    + T CG+
Sbjct:  123 GNYVLGKTIGAGSMGKVKVAHHLKTGEQFAIKIVTRLHPDITKAKAAASAEATKAAQSEKNKEIRTVREAALSTLLRHPYICEARDVYITNSHYYMVFEFVDGGQMLDYIISHGKLKEKQARKFVRQIGSALSYLHQNSVVHRDLKIENILISKTGDIKIIDFGLSNL---YRRQSRLRTFCGS 303          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: KAPC_ASCSU (cAMP-dependent protein kinase catalytic subunit OS=Ascaris suum GN=CAPK PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 48/161 (29.81%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  267 LGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGR-LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKADGSVHTTCGTPAY 746
            +G G+F +VYL ++  + +  A               E +  E  ++  + H  IV+++     K  +Y   + + GGELF+ +   R     +AR Y  +++ A+ + HS+ + +RDLKPENL+L+++G+LK+TDFG +      +      T CGTP Y
Sbjct:   35 IGTGSFGRVYLVQHRASEQYFALKKMAIREVVSMRQTEHVHSEKRLLSRLSHPFIVKMYCASWDKYNLYMLFEYLAGGELFSYLRASRTFSNSMARFYAAEIVCALQYLHSKNIAYRDLKPENLMLNKEGHLKMTDFGFAK-----EVIDRTWTMCGTPEY 190          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 52/145 (35.86%), Postives = 81/145 (55.86%), Query Frame = 3
Query:  267 LGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYF-----AMDLVKGGELFNKIAKGRLRED-VARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLS 683
            +G GT+  VY  R+  TG+ +A                 I REIS++K ++H +IV L +V+   S++Y      +MDL K     + I  G+  +  + + Y  Q++  + FCHSR V HRDLKP+NLL+D+ G +K+ DFGL+
Sbjct:   10 IGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAI-REISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKK---YLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLA 150          
BLAST of CX292480 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 52/145 (35.86%), Postives = 81/145 (55.86%), Query Frame = 3
Query:  267 LGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYF-----AMDLVKGGELFNKIAKGRLRED-VARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLS 683
            +G GT+  VY  R+  TG+ +A                 I REIS++K ++H +IV L +V+   S++Y      +MDL K     + I  G+  +  + + Y  Q++  + FCHSR V HRDLKP+NLL+D+ G +K+ DFGL+
Sbjct:   10 IGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAI-REISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKK---YLDSIPPGQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLA 150          
The following BLAST results are available for this feature:
BLAST of CX292480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y8013_DICDI1.036e-1728.44Probable serine/threonine-protein kinase DDB_G0280... [more]
PRKX_MOUSE1.036e-1732.10Serine/threonine-protein kinase PRKX OS=Mus muscul... [more]
PLK2_RAT1.036e-1732.14Serine/threonine-protein kinase PLK2 OS=Rattus nor... [more]
PLK2_PONAB1.036e-1732.14Serine/threonine-protein kinase PLK2 OS=Pongo abel... [more]
PLK2_HUMAN1.036e-1732.14Serine/threonine-protein kinase PLK2 OS=Homo sapie... [more]
PKH3_YEAST1.036e-1735.17Serine/threonine-protein kinase PKH3 OS=Saccharomy... [more]
KIN1_SCHPO1.036e-1729.89Protein kinase kin1 OS=Schizosaccharomyces pombe G... [more]
KAPC_ASCSU1.036e-1729.81cAMP-dependent protein kinase catalytic subunit OS... [more]
CDC2_RAT1.036e-1735.86Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_MOUSE1.036e-1735.86Cell division control protein 2 homolog OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionC04016B12SK FlavFr1 Citrus clementina cDNA clone C04016B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292480 ID=CX292480; Name=CX292480; organism=Citrus clementina; type=EST; length=747bp
GAGGGATTGCCCGAGCTGTGTTTACGTGCCCAGCGGTGCGTCGGCGGCCG
TAATTGCCACCGGAAACACGTCGAAGACGGGTGATCCTCAACCACCACCA
CAACACAAAAGAAAACCTGAAAGAATTATTTAATTAGCTAAACTTGGTAC
ATATATACGTATAAAAGGAAAAAAAAGACCGCGTGGAGATGGCTACATCA
AACAGTAACGGCGGAGGCGATGACAGGCCGACGTTGCTACATGGGAAATA
CGAGCTGGGGCGTATGCTAGGCCACGGAACCTTCGCGAAGGTGTACCTGG
CAAGAAATTTGCAGACGGGGAAAAGCATGGCCATGAAAGTTGTTGGTAAA
GACAAGGTTATCAAGGTGGGCATGATGGAGCAAATCAAGCGTGAAATCTC
TGTCATGAAGATGGTGAAGCACAAGCACATAGTTGAGCTACACGAAGTCA
TGGCAAGTAAGTCCAAGATTTACTTCGCCATGGACCTCGTCAAAGGCGGC
GAGCTGTTCAACAAGATTGCCAAAGGAAGATTACGAGAAGATGTTGCAAG
GGTTTATTTCCAGCAGCTGATTTCAGCCGTTGATTTCTGCCACAGCCGCG
GCGTTTATCACCGCGACTTGAAGCCTGAGAATCTCTTGCTAGACGAAGAT
GGTAACTTGAAGGTCACGGATTTTGGGCTGAGTGCTTTCTCTGAGCATTT
GAAAGCAGATGGGTCTGTGCATACCACGTGTGGGACTCCAGCTTACG
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