CX293820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 5.395e-54 Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY+EPP APLFE ELSSWSFYRAGIAEFVATFL LY+TVLTVMGVSKS SKC TVGIQGIAWAFGGMIFALVYCTAG+SGGHINPAVTFGL LARKLSLTRAV+Y++MQCL A+ Sbjct: 38 DYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAV 152
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 1.202e-53 Identity = 97/115 (84.35%), Postives = 107/115 (93.04%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAP FEPGEL SWSFYRAGIAEF+ATFL LY+TVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+FY++MQCL AI Sbjct: 31 DYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAI 145
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.202e-53 Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAP FEPGELSSWSF+RAGIAEF+ATFL LYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCL AI Sbjct: 30 DYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAI 144
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.202e-53 Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAP FEPGELSSWSF+RAGIAEF+ATFL LYITVLTVMGV +S + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA++Y++MQCL AI Sbjct: 30 DYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAI 144
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 3.497e-53 Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPPPAPLFEPGEL SWSFYR GIAEFVATFL LYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMI ALVYCTAGIS GHINPAVTFGLFLARKLSLTRAVFY+IMQCL AI Sbjct: 32 DYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAI 145
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 5.965e-53 Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY EPP AP+FE EL+SWSFYRAGIAEFVATFL LYI++LTVMGV+KS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYM MQCL AI Sbjct: 32 DYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAI 146
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 3.875e-44 Identity = 85/115 (73.91%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY +PPPAPL + GEL SWSFYRA IAEF+AT L LY+TV TV+G K C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMI QCL AI Sbjct: 16 DYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAI 130
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.473e-43 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY +PPPAP F+ GEL WSF+RA IAEF+AT L LYITV TV+G K C++VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMI QC AI Sbjct: 18 DYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAI 132
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.126e-42 Identity = 82/115 (71.30%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY +PPPAPL + EL WSFYRA IAEF+AT L LY+TV TV+G C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCL AI Sbjct: 14 DYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAI 128
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 3.627e-42 Identity = 84/117 (71.79%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMG--VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DYT+PPPAPLF+ GEL WSFYRA IAEF+AT L LYITV TV+G V S +C VG GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+S+ RAV Y++ QCL I Sbjct: 16 DYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGI 132 The following BLAST results are available for this feature:
BLAST of CX293820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293820 ID=CX293820; Name=CX293820; organism=Citrus clementina; type=EST; length=346bpback to top |