CX293820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.187e-42 Identity = 86/123 (69.92%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DYT+PPPAPL + EL+ WS YRA IAEF+AT L LYITV TV+G V+ + + CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+I QCL AI Sbjct: 19 DYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAI 141
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.080e-42 Identity = 82/122 (67.21%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSKSK-------SKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY +PPPAPL +P EL+ WS YRA IAEF+AT L LYITVLT++G + ++C VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMI QC AI Sbjct: 18 DYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAI 139
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.055e-41 Identity = 83/123 (67.48%), Postives = 94/123 (76.42%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DYT+PPPAPL + EL SWS YRA IAEF+AT L LYITV TV+G S + + C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCL AI Sbjct: 20 DYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAI 142
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.378e-41 Identity = 83/123 (67.48%), Postives = 94/123 (76.42%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DYT+PPPAPL + EL SWS YRA IAEF+AT L LYITV TV+G S + + C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCL AI Sbjct: 20 DYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAI 142
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 2.351e-41 Identity = 86/121 (71.07%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVS-KSKSK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY +PPP P F+ EL+ WS YRA IAEFVAT L LYITVLTV+G +S +K C VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCL AI Sbjct: 15 DYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAI 135
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.010e-41 Identity = 85/121 (70.25%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVS-KSKSK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY +PPP P F+ EL+ WS YRA IAEFVAT L LY+TVLTV+G +S +K C VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCL AI Sbjct: 15 DYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAI 135
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.237e-41 Identity = 84/123 (68.29%), Postives = 93/123 (75.61%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DYT+PPPAPL + EL+ WS YRA IAEF+AT L LYITV TV+G S + C VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCL AI Sbjct: 20 DYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAI 142
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.237e-41 Identity = 81/125 (64.80%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSK----------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DYT+PPPAPL + EL SWS YRA IAEF+AT L LY+TV TV+G + + C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YM+ QCL A+ Sbjct: 20 DYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAV 144
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.840e-41 Identity = 84/123 (68.29%), Postives = 93/123 (75.61%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DYT+PPPAPL + EL+ WS YRA IAEF+AT L LYITV TV+G S + C VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCL AI Sbjct: 19 DYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAI 141
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.934e-41 Identity = 79/121 (65.29%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 1 DYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSK------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 DY +PPP PLF+ EL WSFYRA IAEF+AT L LY+T++TV+G + +C+ VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK++L RAV YM+ QCL AI Sbjct: 16 DYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAI 136 The following BLAST results are available for this feature:
BLAST of CX293820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293820 ID=CX293820; Name=CX293820; organism=Citrus clementina; type=EST; length=346bpback to top |