CX293820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.648e-11 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 58 SFYRAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 +F++A AEF+A + + ++V + + S++ V + I+ FG I +V C ISGGHINPAVT + RK+S+ ++VFY+ QCL AI Sbjct: 36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAI 130
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.634e-11 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 67 RAGIAEFVATFLVLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 RA I+EF+AT + ++ +V+ + K ST G + +A A + V ISGGH+NPAVTFG + ++SL RAV Y + Q L A+ Sbjct: 26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAV 119
BLAST of CX293820 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.634e-11 Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 37 PGELSSWSFYRAGIAEFVATFLVLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLRAI 345 PGELS +A +AEF++T + ++ + M SK + G+ + A +F V A ISGGH+NPAVTFG F+ +SL +A+ Y + Q L ++ Sbjct: 11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSV 115 The following BLAST results are available for this feature:
BLAST of CX293820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293820 ID=CX293820; Name=CX293820; organism=Citrus clementina; type=EST; length=346bpback to top |