CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 5.381e-29 Identity = 60/146 (41.10%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 KL+L+GD G GK+ L++RF + F STIG F +T+ + +K ++WDTAGQER+ ++ YYRGA I+VYDIT++ SFE + W++ ++ + + L GNK D+ RKV E+A+ A+E+ + F ETSAK++ Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSS 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 7.028e-29 Identity = 60/150 (40.00%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 93 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQE-STIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 ++ K++LLGD G GK+ +++F G F+ +T+G F ++ + V+ VK +IWDTAGQER+ S+ YYR A A +++YDITN++SF+ + W+ E+ ++V+ L GNKAD+ R + +E+ + A+E G+ F+ETSAKT Sbjct: 27 DLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKT 176
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.179e-29 Identity = 66/148 (44.59%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTAT 545 KLVL+GD GK+ +V RF G F E Q STIG F +TL + VK +IWDTAGQER+ ++ YYR A AI+ YDIT ++SF W+++++ N+V L GNK+DL + R+V+ EAQ+ A+ + L +ETSAK ++ Sbjct: 20 KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSS 167
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 9.179e-29 Identity = 62/145 (42.76%), Postives = 93/145 (64.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAK 536 K++L+GD GK+ +V F G + E Q++TIG F ++L ++ VK ++WDTAGQER+ ++ YYR A AAII YD+T +++FE W+ E++ G N+V+ L GNK DL + R V E+A A++ GL +ETSAK Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAK 163
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.199e-28 Identity = 61/144 (42.36%), Postives = 96/144 (66.67%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++L+GD G GKS L++RFV+ +F +TIG F +T+ +N VK ++WDTAGQER+ ++ YYRGA I+VYD+T++ +F K+W + + N + L GNK+D ++ R VTA++ +A A+E G+ F+E+SAK Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPFIESSAK 164
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RABC_DICDI (Ras-related protein RabC OS=Dictyostelium discoideum GN=rabC PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.199e-28 Identity = 60/146 (41.10%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA--TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K++L+G+ G GKSS+++RF F + T+G F +T+ + TVK ++WDTAGQER+ S+ +YRG+ I+VYD+T+ SFER K WV+++ M++ L GNK+D++ RKVT E+ Q A++ F+E SAK Sbjct: 8 KIILVGESGVGKSSILVRFTDNTFSQHFAPTLGVDFNVKTIRNKETGQTVKLQLWDTAGQERFKSITQTFYRGSHGVIVVYDVTDPKSFERCKNWVEDINQYTQDGMIIILVGNKSDMVAQRKVTFEQGQEMAEQLKTKFLEVSAK 153
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.199e-28 Identity = 59/146 (40.41%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 KL+L+GD G GK+ L+ RF + F STIG F +T+ ++ +K +IWDTAGQER+ ++ YYRGA ++VYDITN+ SF+ K W++ ++ + ++ + GNK D+ D R+V+ E + A + G+ F+ETSAK++ Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSS 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB18_CAEEL (Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.199e-28 Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++++G+ G GKSSL+LRFV F Q +TIG F ++A++ VK IWDTAGQER+ +L P YYRGA I VYD+T+++SFE+ W+QE+ N N++ + NK D+ + R VT EE +A+ + F+E SAKT Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPN-RVVTREEGLKFAKRHRTLFIEASAKT 157
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.566e-28 Identity = 61/146 (41.78%), Postives = 88/146 (60.27%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 K + +GD G GKSS++LRF + F E STIG F +T+ + +K +IWDTAGQER+ YRG A ++VYD+T+Q SFE KW+QE++ N++ + GNK+D++ + V AQ +A + F ETSAK A Sbjct: 10 KFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQA 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.566e-28 Identity = 67/158 (42.41%), Postives = 101/158 (63.92%), Query Frame = 3 Query: 72 MATTGN-KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQE-STIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 + +TG+ ++ K++L+GD G GK+ L++RF G F+ ST+G F ++ L V+ VK +IWDTAGQER+ S+ YYR A A +++YDITN+ SF+ + W+ E+Q ++V+ L GNK D R V E+ + A+E GL FMETSA+T Sbjct: 57 LGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSART 214 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |