CX293829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33 Identity = 67/158 (42.41%), Postives = 103/158 (65.19%), Query Frame = 3 Query: 78 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 T + N K+VL+G+ G GK++L+ RF + +F +TIG F ++T+ + A VK +IWDTAG ERY ++ YYRGA A++V+D+T ++ ++W++EL +V+ L GNK+DL AR+V EEA+ +A+ NGL F+ETSA +TNV Sbjct: 5 TEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNV 162
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.913e-33 Identity = 64/149 (42.95%), Postives = 104/149 (69.80%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++T+ T+K ++WDTAGQERY ++ YYRGA A++VYDI QA+++ ++W+ EL+ + N+ + L GNK+DL R+V+ +EA+ +++++ L F+ETSA ++NV Sbjct: 15 KIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNV 163
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.913e-33 Identity = 66/153 (43.14%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 93 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 N K+VL+G+ G GK++L+ RF + +F +TIG F ++T+ + A VK +IWDTAG ERY ++ YYRGA A++V+D+T ++ ++W++EL +V+ L GNK+DL AR+V EEA+ +A+ NGL F+ETSA +TNV Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNV 162
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB17_MOUSE (Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.804e-33 Identity = 71/162 (43.83%), Postives = 109/162 (67.28%), Query Frame = 3 Query: 75 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 +T + +KLVLLG GK+SL LR++K F T+G AFF++ L + +++K EIWDTAGQE+Y S+ +Y+RGA AA++VYDIT + SF +A++W+++L+ + P +V+ L GNK DL + R+VT +E + +A+ L FMETSAK V++ Sbjct: 11 STASGQPYVSKLVLLGSSSVGKTSLALRYMKQDFSNVLP-TVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEGKEFAESKSLLFMETSAKLNYQVSE 171
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.804e-33 Identity = 65/149 (43.62%), Postives = 97/149 (65.10%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+V++GD GKS+L+ R+ + +F ++TIG F +Q++ ++ VK +IWDTAGQER+ ++ YYRGA A++VYDIT ++FE +W+ EL + + L GNK DL R V+ EE ++ A+ GLFFMETSA +TNV Sbjct: 14 KIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNV 162
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.968e-33 Identity = 69/149 (46.31%), Postives = 97/149 (65.10%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ +K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+ E+ + N+ L GNK+DL + V + A+A+A E G+ F+ETSAK ATNV Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNV 158
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: YPT6_YEAST (GTP-binding protein YPT6 OS=Saccharomyces cerevisiae GN=YPT6 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.968e-33 Identity = 69/162 (42.59%), Postives = 107/162 (66.05%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNV 551 M+ +G K+V LG+ G GK+SL+ RF+ F + ++TIG F S+T+ ++D T++ ++WDTAGQER+ SL P Y R + AIIVYDIT + SFE KW+++++ +G+ N+++ + GNK+DL D R+++ EE + A+ G FMETS K NV Sbjct: 1 MSRSGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNV 162
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.968e-33 Identity = 67/150 (44.67%), Postives = 101/150 (67.33%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFER-AKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K++++GD G GKSSL+LRF + E STIG F +T+ +++ T+K +IWDTAGQER+ ++ YYRGA I VYD+TN+ SF+ + W+Q++ N+ L GNK DL+D+R V A+EA+ A++N + ++E SAKT +NV Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNV 158
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 6.489e-33 Identity = 69/149 (46.31%), Postives = 96/149 (64.43%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ +K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+ E+ + N+ L GNK+DL + V A+A+A E G+ F+ETSAK ATNV Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNV 158
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 6.489e-33 Identity = 67/158 (42.41%), Postives = 102/158 (64.56%), Query Frame = 3 Query: 78 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 T + N K+VL+G+ G GK++L+ RF + +F +TIG F ++T+ + A VK +IWDTAG ERY ++ YYRGA A++V+D+T ++ ++W++EL +V+ L GNK+DL AR+V EEA +A+ NGL F+ETSA +TNV Sbjct: 5 TDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNV 162 The following BLAST results are available for this feature:
BLAST of CX293829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293829 ID=CX293829; Name=CX293829; organism=Citrus clementina; type=EST; length=559bpback to top |