CX293829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 6.489e-33 Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK DL + V A+ +A G+ F+ETSAK ATNV Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33 Identity = 64/153 (41.83%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 93 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 N K+VL+G+ G GK++L+ RF + +F +TIG F ++T+ + A +K +IWDTAG ERY ++ YYRGA A++V+D+T ++ ++W++EL +V+ L GNK+DL +R+V EEA+ +A+ NGL F+ETSA +TNV Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNV 162
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33 Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK DL + V A+ +A G+ F+ETSAK ATNV Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 158
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33 Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK DL + V A+ +A G+ F+ETSAK ATNV Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33 Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK DL + V A+ +A G+ F+ETSAK ATNV Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33 Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK DL + V A+ +A G+ F+ETSAK ATNV Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33 Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+QE+ + N+ L GNK DL + V A+ +A G+ F+ETSAK ATNV Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.107e-32 Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 KL+L+GD G GKS L+LRF + E STIG F +T+ ++ T+K +IWDTAGQER+ ++ YYRGA I+VYD+T+Q SF K+W+ E+ N+ L GNK+DL R V+ + A+ +A+ G+ F+ETSAK A NV Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANV 158
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.107e-32 Identity = 69/148 (46.62%), Postives = 101/148 (68.24%), Query Frame = 3 Query: 93 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 ++ +K+VLLG GK++L LR+V G F + STIGA+F ++T+ + +K+ IWD+AGQ+R+ SLA +YYRGA AI+V+DIT Q +F+ K WV+EL+A ++M L GNK DL R+V +E A+ YA E ++ETSAK Sbjct: 7 SMESKVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAK 154
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.107e-32 Identity = 68/151 (45.03%), Postives = 98/151 (64.90%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K +++G G GKS L+ +F++ +F + TIG F S+ + V TVK +IWDTAGQER+ S+ YYRGAA A++VYDIT++ ++ W+ + + +PN+V+ L GNK DL R+VT EA +AQEN L F+ETSA T NV + Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEE 160 The following BLAST results are available for this feature:
BLAST of CX293829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293829 ID=CX293829; Name=CX293829; organism=Citrus clementina; type=EST; length=559bpback to top |