CX293829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.699e-38 Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLVL+GD G GKS+L+ RF K +F +STIG F ++T V VK +IWDTAGQERY ++ YYRGA A+++YD+T A+FE A +W++EL+ +PN+V+ L GNK DL V EEA+A+A+ L+FMETSA ATNV + Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVEN 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.143e-37 Identity = 73/151 (48.34%), Postives = 106/151 (70.20%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K+VL+GD GKS ++ RF + +F ++TIG F ++TLA+ +VK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+A + N+V+ L GNK DL D R V E+A+ +AQ+ GLFF+ETSA ATN+ D Sbjct: 17 KVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLED 167
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.143e-37 Identity = 75/151 (49.67%), Postives = 105/151 (69.54%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL V E+ ++YA++ L FMETSA ATNV D Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVED 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB5B_DICDI (Putative ras-related protein Rab-5B OS=Dictyostelium discoideum GN=rab5B PE=5 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.492e-37 Identity = 79/152 (51.97%), Postives = 107/152 (70.39%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENG-LFFMETSAKTATNVND 557 KLVLLG++ GK+ + R V+ +F +STIGAAF +++ V++ +K EIWDTAGQERY SL PMYYRGAAAA++VYDIT + +FE K+WV ELQ +PN+++ALAGNK DL + R+V +E Y E G F ETSA + N+N+ Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQERYRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDLPN-REVQVDEVNRYISELGNAIFFETSAASGQNINE 200
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.546e-37 Identity = 75/151 (49.67%), Postives = 106/151 (70.20%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLVL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE A +W++EL+ +PN+V+ L GNK+DL V E+ +++A+ L+FMETSA ATNV + Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVEN 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.342e-37 Identity = 72/151 (47.68%), Postives = 107/151 (70.86%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K+VL+GD G GKS+L+ RF K +F +STIG F +++L V+D +K +IWDTAGQERY ++ YYRGA A++VYD+T ++FE + W++EL+ +PN+V+ L GNK+DL V E+A+++A++ L+FMETSA ATNV + Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVEN 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.671e-37 Identity = 74/149 (49.66%), Postives = 102/149 (68.46%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQERY ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R V E+AQ+YA++ GL F+ETSA A NV Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNV 162
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.263e-36 Identity = 73/151 (48.34%), Postives = 105/151 (69.54%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQERY ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNKADL R V+ E+A+A+A+ FFMETSA + NV + Sbjct: 16 KLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVEN 166
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.263e-36 Identity = 71/149 (47.65%), Postives = 105/149 (70.47%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD GKS ++ RF + +F +STIG F ++TL ++ TVK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+ + N+V+ L GNK DL++ R V E+A+ +A++ GLFF+ETSA ATNV Sbjct: 19 KVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNV 167
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.650e-36 Identity = 71/149 (47.65%), Postives = 105/149 (70.47%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R V+ E+ QA A++ GL F+ETSA A N+ Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNI 162 The following BLAST results are available for this feature:
BLAST of CX293829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293829 ID=CX293829; Name=CX293829; organism=Citrus clementina; type=EST; length=559bpback to top |