CX293829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.155e-36 Identity = 71/151 (47.02%), Postives = 105/151 (69.54%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLVL+GD G GKS+L+ RF K +F +STIG F +++L +++ +K +IWDTAGQERY ++ YYRGA A++VYD+T ++E +W++EL+ +PN+V+ L GNK+DL V+ +EA+ A+ GL+FMETSA ATNV + Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVEN 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.815e-36 Identity = 71/151 (47.02%), Postives = 106/151 (70.20%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLVL+GD G GKS+L+ RF + +F +STIG F +++L ++ +K +IWDTAGQERY ++ YYRGA A++VYD+T +FE A +W++EL+ +PN+V+ L GNK+DL V+ E+ +A+A++ L+FMETSA ATNV + Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVEN 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.815e-36 Identity = 70/151 (46.36%), Postives = 104/151 (68.87%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K+VL+GD GK+ ++ RF + +F ++TIG F ++TL + +VK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+A + N+V+ L GNK DL D R V E+A+ +AQ+ GLFF+ETSA AT + D Sbjct: 17 KVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLED 167
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 70/149 (46.98%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 70/149 (46.98%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 70/149 (46.98%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 70/149 (46.98%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 70/149 (46.98%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 70/149 (46.98%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNV 161
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36 Identity = 70/149 (46.98%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNV 161 The following BLAST results are available for this feature:
BLAST of CX293829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293829 ID=CX293829; Name=CX293829; organism=Citrus clementina; type=EST; length=559bpback to top |