CX293829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB40B_HUMAN (Ras-related protein Rab-40B OS=Homo sapiens GN=RAB40B PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18 Identity = 49/151 (32.45%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K +L+GD GK ++ G G + + T+ ++ VK ++WDT+GQ R+ ++ Y RGA I+VYDI N+ SF+ +W++E+ P + L GN+ L R+V E+AQAYA+ G+ F E S N+ + Sbjct: 16 KFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITE 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAS_BOTFU (Ras-like protein OS=Botryotinia fuckeliana GN=ras1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18 Identity = 50/152 (32.89%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLV++G G GKS L ++ ++ F++ + TI ++ Q + +++ ++ DTAGQE Y ++ Y R ++VY IT++ SFE + Q+ L+ + + + GNK DL R+V+ +E Q A + G F+ETSAK+ NV++ Sbjct: 10 KLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLEGERQVSKQEGQQLADDFGCKFIETSAKSRINVDN 160
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAPA_DISOM (Ras-related protein O-Krev OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18 Identity = 56/153 (36.60%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVND 557 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ M L GNK DL D R V E+ Q A++ N F+E+SAK+ NVN+ Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDCQPCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNE 156
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18 Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK-VTAEEAQAYA---QENGLF----FMETSAKTATNVND 557 K++ LGD GK+S+ FV G++ E E T+ +F+S+TL + + V +WDT QER++ L+P+YYR + + +DI N+ SF+ KW+ E + + L G K D+ K ++ E + + ++ G+ + ETSAK + N+ + Sbjct: 7 KIITLGDSYVGKTSVFNNFVTGKY-EINECTVSPSFYSKTLTIENEPVILNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDKWMDEARKFCIGKVPFVLIGTKKDIPRTDKSISKERIEQWCKNIEDQGIIDRVHYFETSAKFSQNITE 164
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAS_LACBI (Ras-like protein OS=Laccaria bicolor PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 50/152 (32.89%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLV++G G GKS L ++ ++ F++ + TI ++ Q + ++D ++ DTAGQE Y ++ Y R ++VY IT++ SFE + Q+ L+ + + + GNK DL R V+ +E ++ A++ G F+ETSAK+ NV + Sbjct: 10 KLVVVGGGGEGKSCLTIQLIQSHFVDEYDPTIEESYRKQCV-IDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLDKERVVSKQEGESLARQFGCKFIETSAKSRINVEN 160
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAS_EMENI (Ras-like protein OS=Emericella nidulans GN=AN0182 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 50/152 (32.89%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 KLV++G G GKS L ++ ++ F++ + TI ++ Q + ++D ++ DTAGQE Y ++ Y R ++VY IT++ SFE + Q+ L+ + + + GNK DL R V+ +E ++ A++ G F+ETSAK+ NV + Sbjct: 10 KLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLDKERVVSEQEGESLARQFGCKFIETSAKSRINVEN 160
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RABL_DICDI (Ras-related protein RabL OS=Dictyostelium discoideum GN=rabL PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 51/159 (32.08%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL----LDARKVTAEEAQAYAQENGLF----FMETSAKTATNVND 557 K++ LGD GK+SL +V G++ + +IG +F + L V + V +WDT GQER+ + +P Y+RGA + +DI N+ SF KW+ E+ N+ L G K+D+ K E+ ++ G+ + ETSAK + NV + Sbjct: 9 KIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWDTCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCYGNIPFVLVGTKSDIPRTDKSISKARIEQWCKNIEDQGIIDKVHYFETSAKLSQNVTE 167
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB36_MOUSE (Ras-related protein Rab-36 OS=Mus musculus GN=Rab36 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 102 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQA--YAQENGLFFMETSAKTATNV 551 +K+V++GD+ GK+SL+ R K F ++TIG F + + +IWDTAGQE++ +A YYRGA I +D+T+ + E ++W++++ + + + L G K DLL EA+A A E + SAKT NV Sbjct: 58 SKVVVVGDLYVGKTSLIHRLCKNVFDHDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDVLRENEAGSCFIFLVGTKKDLLSGAACEQAEAEAVHLANEMQAEYWSVSAKTGENV 210
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 52/148 (35.14%), Postives = 86/148 (58.11%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATN 548 KLVL+GD G GK++ V R + G+F + +TIG N +KF++WDTAGQE++ L YY A II++D+T++ +++ W ++L + N+ + L GNK D+ + RKV A+ + ++N L + + SAK+ N Sbjct: 9 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFHTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTITFHRKKN-LQYYDISAKSNYN 153
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 52/148 (35.14%), Postives = 86/148 (58.11%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATN 548 KLVL+GD G GK++ V R + G+F + +TIG N +KF++WDTAGQE++ L YY A II++D+T++ +++ W ++L + N+ + L GNK D+ + RKV A+ + ++N L + + SAK+ N Sbjct: 9 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTITFHRKKN-LQYYDISAKSNYN 153 The following BLAST results are available for this feature:
BLAST of CX293829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293829 ID=CX293829; Name=CX293829; organism=Citrus clementina; type=EST; length=559bpback to top |