CX293829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 55/153 (35.95%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVND 557 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ + L GNK DL D R V E+ Q A++ N F+E+SAK+ NVN+ Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNE 156
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAN_CAEEL (GTP-binding nuclear protein ran-1 OS=Caenorhabditis elegans GN=ran-1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATN 548 KLVL+GD G GK++ V R + G+F + +T+G N ++F +WDTAGQE++ L YY AII++D+T + +++ W ++L A+ N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDL-ARVCENIPIVLCGNKVDVKD-RKVKAKTITFHRKKN-LQYYDISAKSNYN 155
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB28_PONAB (Ras-related protein Rab-28 OS=Pongo abelii GN=RAB28 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV-NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKW---VQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+V+LGD +GK+SL F + F + + TIG FF + + + + V +IWD GQ + Y GA ++VYDITN SFE + W V+++ + ++AL GNK DL R + E+ + QENG SAKT +V Sbjct: 14 KIVVLGDGASGKTSLATCFAQETFGKRYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETRPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSV 166
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB28_HUMAN (Ras-related protein Rab-28 OS=Homo sapiens GN=RAB28 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV-NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKW---VQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K+V+LGD +GK+SL F + F + + TIG FF + + + + V +IWD GQ + Y GA ++VYDITN SFE + W V+++ + ++AL GNK DL R + E+ + QENG SAKT +V Sbjct: 14 KIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSV 166
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: DJC27_BOVIN (DnaJ homolog subfamily C member 27 OS=Bos taurus GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 46/173 (26.59%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 54 LRSEHPMATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-----NMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 + + P K++ K++ +G+ GKS ++ R+ + +F+ +TIG + + V D +K I+D AG ++ + +Y+ I+VYD+ + SF+ W+ E++ P N+V A+ NK D R V E + +A+ G + ETSA+T +N+ Sbjct: 1 MEASMPKRKEPGKSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVQVRDREIKVNIFDMAGDPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDTWLAEMKQDLGPHGNMENIVFAVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINE 173
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: DJ27A_XENLA (DnaJ homolog subfamily C member 27-A OS=Xenopus laevis GN=dnajc27-A PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 46/161 (28.57%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 90 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWV----QELQAQGN-PNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K + K++ +G+ GKS ++ R+ + +F+ ++TIG + + + D +K I+D AG ++ + +Y+ I+VYD+ ++ +FE W+ QEL QGN N+V A+ NK D R V E + +++ G + ETSA++ +N+ Sbjct: 13 KALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVHIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAEMKQELGPQGNIDNIVFAVCANKIDSTKHRSVDESEGRLWSESKGFLYFETSAQSGEGINE 173
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RIT2_RAT (GTP-binding protein Rit2 OS=Rattus norvegicus GN=Rit2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K+V+LG G GKS++ ++F+ QF ++ + TI A+ +Q + +++ +I DTAGQ + ++ Y RG II Y +T++ SF+ A K+ + + Q + + + L GNK DL R+V+ EE A++ F ETSA ++D Sbjct: 22 KVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGMTLARDYNCAFFETSAALRFGIDD 172
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB40L_HUMAN (Ras-related protein Rab-40A-like OS=Homo sapiens GN=RAB40AL PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K +L+GD GKS ++ G G + + T+ ++ VK ++WDT+GQ R+ ++ Y RGA I+VYDI N+ SFE +W+++++ P + L GN+ L R+V E+AQAYA+ G+ F E S N+ Sbjct: 16 KFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHA-PGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI 163
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB40A_HUMAN (Ras-related protein Rab-40A OS=Homo sapiens GN=RAB40A PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV 551 K +L+GD GKS ++ G G + + T+ ++ VK ++WDT+GQ R+ ++ Y RGA I+VYDI N+ SFE +W+++++ P + L GN+ L R+V E+AQAYA+ G+ F E S N+ Sbjct: 16 KFLLVGDRDVGKSEILESLQDGAAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHA-PGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI 163
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQ-ELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 KLV++GD G GKS+L ++F + F+ + TI ++ T N + ++ DTAGQE + ++ Y R +IVY +T++ASFE ++ Q L+ + + M L NK DL+ RK+T E+ + A ++ + ++ETSAK Sbjct: 15 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAI-LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAK 158 The following BLAST results are available for this feature:
BLAST of CX293829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293829 ID=CX293829; Name=CX293829; organism=Citrus clementina; type=EST; length=559bpback to top |