CX293829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAB32_HUMAN (Ras-related protein Rab-32 OS=Homo sapiens GN=RAB32 PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 50/158 (31.65%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTATNVND 557 K++++G++G GK+S++ R+V F + +TIG F + L + T V+ ++WD AGQER+ ++ +YY+ A A +V+DI+ ++FE KW +L ++ G+P + LA NK D + + + +E+G + ETSAK N+ + Sbjct: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA-NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: GSP1_YARLI (GTP-binding nuclear protein GSP1/Ran OS=Yarrowia lipolytica GN=GSP1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 49/148 (33.11%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATN 548 KLVL+GD G GK++ V R G+F+ +T+G A + ++F++WDTAGQE++ L YY II++D+T++ +++ W ++L + N+ + L GNK D+ + RKV A+ + ++N L + + SAK+ N Sbjct: 9 KLVLVGDGGTGKTTFVKRHETGEFVNRYNATLGVEVHPLNFATDCGNIRFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTITFHRKKN-LQYYDISAKSNYN 153
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: DJC27_DANRE (DnaJ homolog subfamily C member 27 OS=Danio rerio GN=dnajc27 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 46/161 (28.57%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 90 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWV----QELQAQGN-PNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K++ K++ LG+ GKS ++ R+ + +F+ +TIG + + V D +K I+D AG ++ + +Y+ + I+VYD+ + SF+ W+ QE+ +Q N N++ + NK DL R V E + +A+ G + ETSA++ +N+ Sbjct: 13 KSLRVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDSQGVILVYDVGLRESFDALDSWLTEMKQEMGSQANMENIIFVVCANKVDLTKRRVVDESEGRLWAESRGFHYFETSAQSGEGINE 173
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB40B_MOUSE (Ras-related protein Rab-40B OS=Mus musculus GN=Rab40b PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K +L+GD GK ++ G G + T+ ++ VK ++WDT+GQ R+ ++ Y RGA ++VYDI N+ SF+ +W++E+ P + L GN+ L R+V E+AQAYA+ G+ F E S N+ + Sbjct: 16 KFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDHKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITE 165
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RB32C_DICDI (Ras-related protein Rab-32C OS=Dictyostelium discoideum GN=rab32C PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 3 Query: 87 NKN-----INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVND 557 NKN I+ K++++G + GK+S++ R+ F + TIG F + L + V ++WD AGQER+ + +Y++ A A+IV+D T +F AK W ++ N N+ L NK DLL E+ + ++N + TSAK T +N+ Sbjct: 19 NKNNDDEAISLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVLLQLWDIAGQERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDIDYCFNNENLPTILLANKCDLLTPPYTFPEDINTFCEQNRFNKYFYTSAKEDTGINE 182
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAP1B_RAT (Ras-related protein Rap-1b OS=Rattus norvegicus GN=Rap1b PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 55/153 (35.95%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQE-NGLFFMETSAKTATNVND 557 KLV+LG G GKS+L ++FV+G F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + +VY IT Q++F + ++ L+ + ++ M L GNK DL D R V E+ Q A++ + F+E+SAK+ NVN+ Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWSNCAFLESSAKSKINVNE 156
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAN_TETTH (GTP-binding nuclear protein Ran OS=Tetrahymena thermophila PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 KLVL+GD G GK++ V R G+F + +T G + L ++F IWDTAGQE+ L YY GA AAI+++D+T++ +++ KW ++L + N+ + L GNK D D RKV A + + ++ L + + SAK+ Sbjct: 13 KLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMVLYTTKGPIRFNIWDTAGQEKLGGLREGYYIGANAAIMMFDVTSRITYKNIPKWHKDL-TRICENIPIVLVGNKVDSKD-RKVKARQI-TFHRKRSLQYYDVSAKS 154
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAN_DROME (GTP-binding nuclear protein Ran OS=Drosophila melanogaster GN=ran PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 52/159 (32.70%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 72 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATN 548 MA G K VL+GD G GK++ V R + G+F + +T+G N ++F +WDTAGQE++ L YY A+I++D+T++ +++ W ++L + N+ + L GNK D+ D RKV A+ + ++N L + + SAK+ N Sbjct: 1 MAQEGQDIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYN 156
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RIT2_MOUSE (GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.314e-17 Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K+V+LG G GKS++ ++F+ QF ++ + TI A+ +Q + +++ +I DTAGQ + ++ Y RG II Y +T++ SF+ A K+ + + Q + + + L GNK DL R+V+ EE A++ F ETSA ++D Sbjct: 22 KVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGMNLARDYNCAFFETSAALRFGIDD 172
BLAST of CX293829 vs. ExPASy Swiss-Prot
Match: RAS3_DROME (Ras-like protein 3 OS=Drosophila melanogaster GN=R PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.314e-17 Identity = 54/152 (35.53%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 557 K+V+LG G GKS+L ++FV+ F+E + TI ++ Q + V+ EI DTAG E++ ++ +Y + ++VY IT Q++F + ++ L+ + ++ M L GNK DL + R V E + A + FMETSAK NVND Sbjct: 5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQ-VEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGKNLATQFNCAFMETSAKAKVNVND 155 The following BLAST results are available for this feature:
BLAST of CX293829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293829 ID=CX293829; Name=CX293829; organism=Citrus clementina; type=EST; length=559bpback to top |