CX293835

Overview
NameCX293835
Unique NameCX293835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10397 contig Ccv1_Contig10397:6..519. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.258e-39
Identity = 77/155 (49.68%), Postives = 106/155 (68.39%), Query Frame = 2
Query:   56 ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK-QNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAKARENL-KMLERALEGKPFFGGDKIGFLDIAV 514
            + V LL  WAS + +R + AL  KGV YEY EENL N+SPLLL+ NP++KKIPVL+HNGKP+ ES +I++YIDE W  ++PL+P DPY+R+ ARFW  + D+K        + S+GEE E+  K   ++ K LE  L  KPF+G D  GF+D+ +
Sbjct:    3 DEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCL 157          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 8.030e-37
Identity = 76/163 (46.63%), Postives = 106/163 (65.03%), Query Frame = 2
Query:   62 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK-----QNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAKARENLKMLE-------RALEGKPFFGGDKIGFLDIAV 514
            +KLLG W+SP+A+RV+  L LK + YEYVEENL +KS LLL  NPV+K +PVL+H G+P+ ES +I++YIDE W      +  ++P DPYERA ARFWA + D+K  P  +        E+E+AA   + +  LE          +GKPFFGGD +GF+D+ +
Sbjct:    7 LKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVL 169          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.163e-29
Identity = 75/169 (44.38%), Postives = 106/169 (62.72%), Query Frame = 2
Query:   47 MAEES-VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNP-LLP-------EDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAK-ARENLKMLERALEGKPFF---GGDKIGFLDIAV 514
            MAEE  + LL +W SPF  R + A+  KG+ +EY EE+L NKS LLLR NPV++KIPVL+H G+P++ESL+I++Y+D+A+   P LLP       +  Y RA ARFWA + D K        +  +GE Q  A +   E L+ LE  L  + FF   GG ++GF+D+A+
Sbjct:    1 MAEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVAL 169          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.793e-28
Identity = 73/169 (43.20%), Postives = 104/169 (61.54%), Query Frame = 2
Query:   47 MAEES-VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLL--------PEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAK-ARENLKMLERALEGKPFF---GGDKIGFLDIAV 514
            MAEE  + LL +W SPF  R + A+  KG+ +EY EE+L NKS LLLR NPV++KIPVL+H G+P++ESL+I++Y+D+A+   P L         +  Y RA ARFWA + D K        +  +GE Q  A +   E L+ LE  L  + FF   GG ++GF+D+A+
Sbjct:    1 MAEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVAL 169          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.278e-22
Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 2
Query:   62 VKLLGYWASPFALRVKWALKLKGVHYEYVEENL-PNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWKQNP-------LLPEDPYERANARFWAKFFDEKCVP--EVMGAFASQGEEQEKAAKARENLKMLERALE----GKPFF-GGDKI-GFLDIAV 514
            +++LG   SPF  R + AL L+GV YE ++E L P KS  LL  NPVY KIPVL+  +G+ + ES +I++YI++  +++        LLP+DPYERA  RFW  F D+K  P  + +    + G   + A   R  L +LE A +    G+ FF GGD   G LD+A+
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLAL 168          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.206e-16
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 2
Query:   53 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAF-ASQGEEQEKAAKA--RENLKMLERALEGK--PFFGGDKIGFLDIAV 514
            E S+++      PFA R +  LK KG+ +E +  NL NK     + NP +  +PVL ++ G+ + ES +  EY+DEA+    LLP+DPYE+A  +   + F +  VP ++G+F  SQ +E     K   R+    LE  L  K   FFGG+ I  +D  +
Sbjct:   21 EGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNP-FGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSK--VPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLI 177          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 51/161 (31.68%), Postives = 83/161 (51.55%), Query Frame = 2
Query:   53 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAKARENLK----MLERALEGK--PFFGGDKIGFLDIAV 514
            E  +++      PFA R    LK KG+ +E +  NL NK       NP +  +PVL +  G  + ES++  EY+DEA+ +  L P+DPYE+A  +   + F +  VP ++ +F  + + +E     +E LK     LE A+  K   FFGG+ +  +D  +
Sbjct:   21 EGQIRVYSMRFCPFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNP-FGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSK--VPSLVTSFI-RAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLI 177          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 50/156 (32.05%), Postives = 82/156 (52.56%), Query Frame = 2
Query:   53 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAF--ASQGEEQEKAAKAREN-LKMLERALEG-KPFFGGDKIGFLD 505
            E  +++      PFA R    LK KG+ +E +  NL NK       NP+   +PVL ++ G  + ES++  EY+DEA+ +  L P+DPY++A  +   + F +  VP ++ +F  + + E+     +A EN  K LE  ++  K F GGD    +D
Sbjct:   21 EGQIRVYSMRFCPFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPL-GLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSK--VPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVD 173          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: MAAI_DICDI (Maleylacetoacetate isomerase OS=Dictyostelium discoideum GN=mai PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.248e-13
Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEY-----VEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVP----EVMGAFAS-QGEEQEKAAKAR----ENLKMLERALE---GKPFFGGDKIGFLDIAV 514
            M E    L  YW S  + RV+ AL  K + YEY     +++    KS    + NP+ K IP L  +G  + +SL I+EY++E   +NPL+P+  YERA AR   +       P    +V+G  A   G++ +K+  AR         LE+ LE   GK F  GD + F D+ +
Sbjct:    1 MTENKTVLYSYWRSSCSWRVRVALAYKKIKYEYKAIHLLKDGGQQKSDEYSKLNPM-KAIPTLEIDGHIIGQSLAILEYLEETHPENPLMPKGSYERAIARQMMQIIGSDIQPLQNLKVLGLIAQYSGDDSKKSEWARTVITNGFNGLEKLLEKHSGK-FCVGDSVSFADLCL 171          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPL--LLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANAR 334
            M+ +   L  YW S  + RV+ AL LK V YEY   +L ++     L   NP   K+P  V +G+ + ESL IIEY++E     PLLP+DP +RA+AR
Sbjct:    1 MSNQKPVLYSYWRSSCSWRVRIALALKNVDYEYKTVDLLSEEAKSKLKEINPA-AKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHAR 97          
The following BLAST results are available for this feature:
BLAST of CX293835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTX3_SOYBN2.258e-3949.68Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTU6_ORYSJ8.030e-3746.63Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTU1_ORYSJ6.163e-2944.38Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.793e-2843.20Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE4.278e-2240.48Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTO1_HUMAN1.206e-1635.00Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT3.283e-1431.68Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_MOUSE5.600e-1432.05Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
MAAI_DICDI1.248e-1333.53Maleylacetoacetate isomerase OS=Dictyostelium disc... [more]
MAAI_CAEEL1.168e-1141.84Probable maleylacetoacetate isomerase OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionC05001D02SK FlavSen1 Citrus clementina cDNA clone C05001D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293835 ID=CX293835; Name=CX293835; organism=Citrus clementina; type=EST; length=514bp
ATTCATTTAGATATTATCACGCGCTGCTTTTGCTTGGCGAGCAATAATGG
CTGAAGAAAGTGTGAAGTTGCTGGGTTACTGGGCAAGCCCCTTTGCTCTT
AGAGTTAAGTGGGCGCTCAAACTGAAGGGAGTTCACTACGAATATGTTGA
AGAGAATCTCCCCAACAAGAGTCCCTTGCTGTTGCGATACAATCCGGTTT
ATAAGAAGATTCCAGTTCTTGTACACAATGGGAAACCATTGGCAGAATCA
CTACTGATCATCGAATACATTGATGAAGCGTGGAAACAAAATCCTCTCCT
CCCAGAAGATCCTTACGAACGGGCCAATGCACGTTTCTGGGCAAAATTCT
TTGATGAGAAGTGTGTACCTGAAGTCATGGGAGCATTTGCCTCACAAGGG
GAGGAACAAGAGAAAGCTGCAAAAGCTCGAGAGAATCTGAAGATGCTGGA
AAGGGCTCTGGAGGGGAAGCCCTTTTTTGGTGGTGACAAGATAGGCTTTC
TGGACATTGCTGTG
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