CX293839

Overview
NameCX293839
Unique NameCX293839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2034 contig Ccv1_Contig2034:3..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECOSE (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain SE11) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECOLI (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain K12) GN=hcaB PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECOLC (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECOHS (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECODH (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECOBW (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECO8A (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++   +G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALI-SSEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECO55 (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECO24 (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
[Close]
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HCAB_ECO5E (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ L+
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIAGE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLA 171
The following BLAST results are available for this feature:
BLAST of CX293839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
HCAB_ECOSE1.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECOLI1.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECOLC1.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECOHS1.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECODH1.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECOBW1.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECO8A1.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECO551.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECO241.006e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECO5E1.716e-1332.453-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]

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Properties
Property NameValue
Genbank descriptionC05001D06SK FlavSen1 Citrus clementina cDNA clone C05001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293839 ID=CX293839; Name=CX293839; organism=Citrus clementina; type=EST; length=593bp
AGTTTCTTGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTT
GAAGAAAAGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGA
AGGCAAAGTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGG
CGGTTGAACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTC
CAGGATAAGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTG
CTACATCCATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTG
ATACCGCCGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCA
GGAATTCTTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGA
TCTAGAACGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCA
AGCATGCTGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTT
ACAGCTAGTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATAC
AATATCCAAATATGGGATTTTAGGACTAGTAAAGTGCTTGTCA
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