CX293840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.168e-18 Identity = 42/66 (63.64%), Postives = 56/66 (84.85%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSN 441 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVAL++FS R +LYE++++S+ ATI+RY++ + N Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGN 78
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.602e-18 Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYK 417 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S + TI+RY+ Sbjct: 13 NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYR 70
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.399e-18 Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEA 489 N+T+RQVTF KRRNG+ KKA EL++LCDAEV L++FSS GRLYEY++ S+++ IDRY K+ D + + +F+Q+EA Sbjct: 13 NSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKS-KDEQQAVANPNSELKFWQREA 93
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.439e-18 Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSIT 456 N NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS+RG+LYE+ + +S+ T++RY+K C + G++T Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQK-CNYGAPEGNVT 83
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 7.572e-18 Identity = 44/60 (73.33%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S + T+DRY+K Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQK 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17 Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNP 444 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + P Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEP 80
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17 Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEA 489 N+T+RQVTF KRRNGLLKKA ELS+LCDAEV L+VFSS GRLYE+++ +++ IDRY A + + +E + +Q+EA Sbjct: 13 NSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEELLGGNATSE--IKIWQREA 92
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 253 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQE 486 NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + P T + Q+ Sbjct: 16 NRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQ 94
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17 Identity = 43/64 (67.19%), Postives = 55/64 (85.94%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACAD 432 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+ +++S+ T++RY+K D Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQD 76
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17 Identity = 43/60 (71.67%), Postives = 54/60 (90.00%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKK 420 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQK 72 The following BLAST results are available for this feature:
BLAST of CX293840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293840 ID=CX293840; Name=CX293840; organism=Citrus clementina; type=EST; length=494bpback to top |