CX293840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEAT 492 NT NRQVTF KRR GL+KKA EL++LCDA+V LIVFS GRLY+++++S+++ I+RY++A + NP S +F+Q+E T Sbjct: 13 NTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMS----EAKFWQREVT 94
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16 Identity = 41/59 (69.49%), Postives = 52/59 (88.14%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYK 417 N +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RGRL+E++ +S + T++RY+ Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYR 71
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16 Identity = 41/59 (69.49%), Postives = 52/59 (88.14%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYK 417 N +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RGRL+E++ +S + T++RY+ Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYR 71
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16 Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGS-ITEANTQFY 477 N +RQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGRL+E++++S + T++RY+ +S + + E N Q Y Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQEY 92
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16 Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGS-ITEANTQFY 477 N +RQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGRL+E++++S + T++RY+ +S + + E N Q Y Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQEY 92
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.155e-16 Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEA 489 N T+RQVTF KRR+GL KKA ELS+LCDAEV L+VFSS RLY++A++S+++ I+RY + D + + + +QQEA Sbjct: 13 NATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMN-ASSEAKLWQQEA 93
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.426e-16 Identity = 42/77 (54.55%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ 471 N NRQVTF KRRNGLLKKA+E+SVLCDA+VALIVFS++G+LYE+ +++S+ ++RY++ D ++ E NT+ Sbjct: 13 NKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDER---AVLEPNTE 86
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 5.426e-16 Identity = 42/77 (54.55%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ 471 N NRQVTF KRRNGLLKKA+E+SVLCDA+VALIVFS++G+LYE+ +++S+ ++RY++ D ++ E NT+ Sbjct: 13 NKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDER---AVLEPNTE 86
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16 Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQE 486 N +RQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY+++++S + T++RY++ S + + T Q QE Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQE 94
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK--------ACADSSNPGSIT 456 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYAN+S + ++RY++ D ++PGS T Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWT 92 The following BLAST results are available for this feature:
BLAST of CX293840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293840 ID=CX293840; Name=CX293840; organism=Citrus clementina; type=EST; length=494bpback to top |