CX293840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 9.256e-16 Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEA 489 ++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FS+ +LY++A++SV++TI+R+ A + NP S +F+Q+EA Sbjct: 13 DSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPAS----EVKFWQREA 93
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.579e-15 Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK--------ACADSSNPGSITEANTQ 471 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYA +S + ++RY++ D ++PGS T N + Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAK 97
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.062e-15 Identity = 39/60 (65.00%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYAN+S + ++RY++ Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYER 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.517e-15 Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRRNGLLKKA+E+SVLCDAEVA IVFS +G+LYEYA +S + ++RY++ Sbjct: 13 NKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYER 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15 Identity = 39/60 (65.00%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 NT NRQVTF KRR+GLLKKA E+SVLCDAEVALI+FS++G+LY+YA +S + ++RY++ Sbjct: 13 NTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYER 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPG 447 N +RQVTF KRR GLLKKA+ELSVLCDAEVA+IVFS G+L+E+++ S++ T+ RY S PG Sbjct: 13 NANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRYGNYQISSDVPG 80
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15 Identity = 39/60 (65.00%), Postives = 51/60 (85.00%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFSS+G+L+EY+ +S + ++RY + Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDR 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 7.835e-15 Identity = 39/60 (65.00%), Postives = 51/60 (85.00%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRR+GLLKKA E+SVLCDAEVALI+FS++G+LYEYA +S + ++RY++ Sbjct: 13 NKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYER 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14 Identity = 37/60 (61.67%), Postives = 51/60 (85.00%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FSS+G+L+EY+ +S + ++RY + Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDR 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14 Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 N +RQVTF KRR+GLLKKA ELSVLCDAEVA+IVFS G+L+EY++ ++ T+ RY Sbjct: 13 NANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRY 69 The following BLAST results are available for this feature:
BLAST of CX293840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293840 ID=CX293840; Name=CX293840; organism=Citrus clementina; type=EST; length=494bpback to top |