CX293840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14 Identity = 37/60 (61.67%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S + ++RY++ Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYER 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14 Identity = 37/60 (61.67%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S + ++RY++ Sbjct: 13 NKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYER 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14 Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSS-NPGSI 453 N +RQVTFCKRR GLLKKA ELSVLCDA+V +I+FSS+G+L+E A N ++ ++RY+ A PG++ Sbjct: 13 NPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGAL 84
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKA 423 N T+RQVTF KRR+GL+KK +ELSVLCDA++ LIVFS++G+L EY S++ IDRY KA Sbjct: 13 NNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKA 74
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14 Identity = 37/60 (61.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK 420 N NRQVTF KRR GLLKKA E+SVLCDAEV+LIVFS +G+L+EY++ S + ++RY++ Sbjct: 13 NKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYER 72
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14 Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY 414 N T RQVTF KRR GL KKA ELSVLCDA+VALI+FSS G+L+E+ ++S++ ++R+ Sbjct: 13 NATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERH 69
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14 Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSN 441 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQAN 79
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14 Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSN 441 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQAN 79
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14 Identity = 35/56 (62.50%), Postives = 48/56 (85.71%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDR 411 N+T RQVTF KRR GL KKA ELSVLCDA+VALI+FSS G+L++Y+++S++ ++R Sbjct: 13 NSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILER 68
BLAST of CX293840 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13 Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 244 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSIT 456 N +RQVTFCKRR GLLKKA ELSVLCDAE+ +++FS +G+L+E A ++ ID+Y K S T Sbjct: 13 NPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSAT 84 The following BLAST results are available for this feature:
BLAST of CX293840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293840 ID=CX293840; Name=CX293840; organism=Citrus clementina; type=EST; length=494bpback to top |